SaccoPerfettoLab / SignalingProfilerLinks
SignalingProfiler is a pipeline that builds signaling networks to cellular phenotypes from multiomics data.
☆15Updated 3 months ago
Alternatives and similar repositories for SignalingProfiler
Users that are interested in SignalingProfiler are comparing it to the libraries listed below
Sorting:
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆28Updated 2 years ago
- ☆15Updated 2 years ago
- A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data☆23Updated 9 months ago
- Single cell proteomics data processing☆29Updated 3 weeks ago
- ☆25Updated 4 months ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆11Updated 11 months ago
- Analysis for 2019 submission "Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis" Schaffli…☆22Updated 4 years ago
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆33Updated 6 months ago
- Multiple trajectory alignment of time-series data☆13Updated last year
- A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics☆12Updated last year
- scRNAseq integration with triplet neural networks☆41Updated 2 years ago
- ☆12Updated last year
- Feature selection for preserving biological trajectories in single-cell data☆20Updated 4 months ago
- Using self-organizing maps for visualization and interpretation of cytometry data☆65Updated last year
- ☆28Updated 2 years ago
- Clone of the Bioconductor repository for the scRNAseq package.☆29Updated 8 months ago
- reverse gene expression score☆15Updated 2 years ago
- An R package for single-cell CRISPR screen data analysis emphasizing statistical rigor, massive scalability, and ease of use.☆34Updated last month
- Explore the cancer relevance of your gene list☆52Updated 2 weeks ago
- Regulatory networks with Direct Information in python☆40Updated 2 years ago
- Finding the causality in biological pathways☆13Updated 2 years ago
- Materials and scripts for building cell type encyclopedia table☆20Updated last week
- Interactive tool for Phosphoproteomics☆13Updated 5 years ago
- ☆16Updated last year
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Updated last year
- A collection of project templates and useful functions for single-cell data analysis with Scanpy.☆20Updated 2 years ago
- ☆22Updated 5 years ago
- Code space for 'Evaluation of large language models for discovery of gene set function'☆39Updated 9 months ago
- Code to reproduce TNBC analysis and figures☆24Updated 3 years ago
- ☆14Updated 5 years ago