Alternatives and similar repositories for vevo_Tahoe_100m_analysis

Users that are interested in vevo_Tahoe_100m_analysis are comparing it to the libraries listed below

• Genentech / decima
  Decima is a Python library to train sequence models on single-cell RNA-seq data.
  ☆50Updated last week
• MaayanLab / blitzgsea
  Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …
  ☆55Updated 5 months ago
• mcvickerlab / GenVarLoader
  Dataloader for applying sequence models to personalized genomics
  ☆27Updated last week
• BorchLab / Ibex
  Using BCR and expression for sequence embedding
  ☆25Updated last week
• altoslabs / perturbench
  ☆56Updated last month
• cellatlas / human
  ☆44Updated last year
• EngreitzLab / scE2G
  Pipeline to run scE2G
  ☆30Updated 3 weeks ago
• emmijokinen / TCRconv
  TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TC…
  ☆25Updated 3 years ago
• DanHanh / scLinear
  ☆19Updated last year
• kundajelab / coessentiality
  Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
  ☆27Updated 3 years ago
• MaayanLab / archs4
  ARCHS4 RNA-seq processing scripts and web server pages.
  ☆60Updated 4 years ago
• PMBio / deeprvat
  ☆40Updated 5 months ago
• regulatory-genomics / precellar
  Universal Single-Cell Genomics Preprocessing package
  ☆44Updated last week
• theislab / scTab
  ☆61Updated last year
• cantinilab / HuMMuS
  Molecular interactions inference from single-cell multi-omics data
  ☆28Updated 3 weeks ago
• Center-for-Health-Data-Science / multiDGD
  ☆26Updated 5 months ago
• DendrouLab / panpipes
  Multi-modal single cell analysis pipelines
  ☆59Updated 3 weeks ago
• netZoo / netbooks
  Netbooks is a JupyterHub catalog of use cases in gene regulatory network inference using netZoo methods..
  ☆44Updated 3 weeks ago
• ajaynadig / TRADEtools
  ☆32Updated 8 months ago
• LukszaLab / NeoantigenEditing
  ☆20Updated 3 years ago
• ArcInstitute / scRecounter
  Nextflow pipeline to re-process all public single-cell RNA-seq data
  ☆30Updated 4 months ago
• Novartis / scar
  scAR (single-cell Ambient Remover) is a deep learning model for removal of the ambient signals in droplet-based single cell omics
  ☆56Updated last year
• rs239 / velorama
  Gene regulatory network inference for RNA velocity and pseudotime data
  ☆27Updated last week
• pepkit / geofetch
  Builds a PEP from SRA or GEO accessions
  ☆53Updated last week
• czi-ai / transcriptformer
  ☆91Updated last week
• LieberInstitute / recount3
  Explore and download data from the recount3 project
  ☆36Updated last month
• karbalayghareh / GraphReg
  Chromatin interaction aware gene regulatory modeling with graph attention networks
  ☆27Updated 2 years ago
• SingleRust / SingleRust
  Single Rust: Pioneering single-cell analysis with Rust's concurrency for scalable, high-throughput pipelines. 🧬🚀
  ☆77Updated this week
• chanzuckerberg / single-cell-curation
  Code and documentation for the curation of cellxgene datasets
  ☆49Updated last week
• jshilts / shilts-et-al-2022-immunoreceptors
  Supporting data files and code for the publication by Shilts et al.
  ☆31Updated 3 years ago