spSeudoMap: cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data
☆13Sep 29, 2024Updated last year
Alternatives and similar repositories for spSeudoMap
Users that are interested in spSeudoMap are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- UniCell Deconvolve Paper☆10Apr 25, 2023Updated 2 years ago
- domain adaptation of spatial and single-cell transcriptome☆28Sep 21, 2024Updated last year
- spatial transcriptome, single cell☆74Mar 18, 2023Updated 3 years ago
- metabolomics/lipidomics data processing☆10Feb 17, 2021Updated 5 years ago
- R package for generalized binary covariance decomposition.☆16Jul 13, 2025Updated 8 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆40Aug 11, 2022Updated 3 years ago
- A unified interface to spatial transcriptomics deconvolution tools☆45Feb 15, 2026Updated last month
- A robust and accurate cell type classifier for single cell RNA-seq data☆17Mar 15, 2023Updated 3 years ago
- ☆11Apr 1, 2024Updated last year
- This repository contains the CellTag data analysis R package to support clone calling and lineage reconstruction.☆21Oct 19, 2022Updated 3 years ago
- Debug tool to watch objects/expressions while running an R script☆17Jul 25, 2018Updated 7 years ago
- Nextflow-powered MS-DIAL☆12Jan 13, 2025Updated last year
- AnnData interoperability in R☆164Mar 18, 2026Updated last week
- A Toolbox for Spatial Transcriptomics Analysis☆166May 6, 2025Updated 10 months ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- Data-driven signal detection for unbiased scRNA-seq data analysis☆22Jan 22, 2026Updated 2 months ago
- Difference in Intercellular Communication from scRNA-seq data☆25Oct 14, 2025Updated 5 months ago
- A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.☆17Sep 6, 2025Updated 6 months ago
- UniCell Deconvolve - Cloud Cell Type Deconvolution For Transcriptomic Data☆27Jul 26, 2023Updated 2 years ago
- The benchmarking of spatial transcriptomics deconvolution methods☆34Feb 24, 2023Updated 3 years ago
- Ensemble Learning for Harmonization and Annotation of Single Cells (ELeFHAnt) provides an easy to use R package for users to annotate clu…☆23Jul 18, 2022Updated 3 years ago
- Using traditional machine learning and deep learning methods to predict stuff from TCGA pathology slides.☆18Sep 24, 2018Updated 7 years ago
- HoloNet. Reveal the holograph of functional communication events in spatial transcriptomics. Help understand how microenvironments shapin…☆22Aug 30, 2024Updated last year
- ☆41Feb 4, 2026Updated last month
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- ☆37Sep 20, 2022Updated 3 years ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Oct 28, 2019Updated 6 years ago
- Visualization and analysis platform for metabolic data and network pattern recognition☆40Mar 24, 2025Updated last year
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- Code for single-cell eQTL analysis of memory T cell data in Nathan, et al. bioRxiv (2021)☆22Jul 6, 2023Updated 2 years ago
- An R package for interacting with Anthropic's API☆44Jan 24, 2026Updated 2 months ago
- Spatial transcriptomics of heart tissue☆107Oct 7, 2023Updated 2 years ago
- ☆13Feb 15, 2024Updated 2 years ago
- ☆29Nov 15, 2023Updated 2 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆12Mar 20, 2024Updated 2 years ago
- Single Cell RNA PolyA Site Discovery☆11Jan 28, 2026Updated last month
- code and dataset for spatialDWLS☆14Apr 18, 2021Updated 4 years ago
- Gene orthologs for model organisms in a tidy data format☆14Sep 29, 2022Updated 3 years ago
- ☆32Jan 7, 2026Updated 2 months ago
- IAN: An Intelligent System for Omics Data Analysis and Discovery☆10Feb 23, 2026Updated last month
- ☆45May 23, 2025Updated 10 months ago