malhamdoosh / EGSEALinks
This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.
☆10Updated last year
Alternatives and similar repositories for EGSEA
Users that are interested in EGSEA are comparing it to the libraries listed below
Sorting:
- The blog of tidyomics☆14Updated this week
- Gene-level general linear mixed model☆22Updated 5 months ago
- An R package for multi-dimensional pathway enrichment analysis☆16Updated 3 months ago
- A Grammar of Data Manipulation for Omics Data☆21Updated 4 years ago
- R package for benchmarking single cell analysis methods☆31Updated last year
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- Toolbox package for organizing and working with TCGA data☆28Updated last week
- Code for EpiMap data browser☆14Updated last year
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- This is the ensembldb development repository.☆35Updated 10 months ago
- zero-inflated negative binomial gene expression in R☆20Updated 7 years ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated 2 months ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- Clone of the Bioconductor repository for the basilisk package.☆28Updated last month
- Template for building a bioconductor workshop package using github actions☆20Updated 3 weeks ago
- NGS workflow templates and sample data☆9Updated last month
- Single Cell multimodal data scripts for downloading datasets☆17Updated last month
- Repository for supplemental material of manuscripts☆18Updated 4 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- R/Bioconductor package to interactively explore single cell clusters at multiple resolutions☆10Updated 3 years ago
- CellAnn☆12Updated last year
- Assessing the increase in power from increasing read depth in a given RNA-Seq study☆13Updated 6 years ago
- R package for Flexible dot plots☆29Updated 3 years ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆33Updated 2 weeks ago
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Updated 7 years ago
- Interactive benchmarking of ranking and assignment methods☆16Updated 3 months ago
- An R package to plot interactive three-way differential expression analysis☆38Updated last year
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆20Updated last week