☆11May 25, 2025Updated 9 months ago
Alternatives and similar repositories for ImmuCellAI-mouse
Users that are interested in ImmuCellAI-mouse are comparing it to the libraries listed below
Sorting:
- ImmuCellAI (Immune Cell Abundance Identifier) is a tool to estimate the abundance of 24 immune cells from gene expression dataset includi…☆15May 25, 2025Updated 9 months ago
- Cell-Centric View of Tissue Transcriptome Measuring Cellular Compositions of Immune Microenvironment From Mouse RNA-Seq Data.☆27Nov 2, 2021Updated 4 years ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- Tools for metabolomic data☆35Oct 4, 2024Updated last year
- Lung cancer 10X analysis☆11Dec 30, 2020Updated 5 years ago
- co-expressed gene-set enrichment analysis☆13Nov 20, 2023Updated 2 years ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆14Jul 5, 2023Updated 2 years ago
- Identification of clone-specific and cancer-selective multi-targeting therapeutic options based on single-cell transcriptomic profiles of…☆19Feb 20, 2025Updated last year
- R functions underlying OmicsNet☆20Feb 10, 2026Updated 3 weeks ago
- ☆17Jan 9, 2023Updated 3 years ago
- SCALLOP-INF analysis☆20Oct 24, 2025Updated 4 months ago
- ☆20Sep 8, 2023Updated 2 years ago
- Connecting GWAS summary data to analytical tools☆23Mar 25, 2024Updated last year
- Difference in Intercellular Communication from scRNA-seq data☆24Oct 14, 2025Updated 4 months ago
- R-code used for single-cell RNA-Seq analysis of kidney data.☆18Oct 17, 2019Updated 6 years ago
- CDSeq R Package☆21Jul 1, 2025Updated 8 months ago
- Calculate cluster similarity between clusters from different single cell datasets/batches/samples.☆25Feb 2, 2026Updated last month
- ☆19Jul 8, 2021Updated 4 years ago
- Visualize the results of cell-cell communication analysis☆24Jan 21, 2023Updated 3 years ago
- Landscape Single Cell Entropy☆21Aug 24, 2020Updated 5 years ago
- Methods for decontamination of single cell data☆58Feb 16, 2025Updated last year
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆22Jul 11, 2021Updated 4 years ago
- Transform files to the microtable object with microeco package☆28Feb 13, 2026Updated 3 weeks ago
- Spatial Cellular Estimator for Tumors☆61Feb 9, 2026Updated 3 weeks ago
- ☆31Apr 9, 2022Updated 3 years ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Nov 10, 2021Updated 4 years ago
- The integration of single cell rank-based gene set enrichment analysis☆147Jan 14, 2026Updated last month
- The repo for LFQ-Analyst☆30Aug 7, 2024Updated last year
- Assessing the purity of single cell population☆143Jun 3, 2022Updated 3 years ago
- Calculating and Visualizing ROC and PR Curves Across Multi-Class Classifications☆34Feb 10, 2021Updated 5 years ago
- ☆38May 22, 2024Updated last year
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆33Nov 28, 2025Updated 3 months ago
- Pan-Cancer Single Cell Classifier☆84May 30, 2024Updated last year
- Feature selection package of the mlr3 ecosystem.☆38Dec 13, 2025Updated 2 months ago
- ☆40Jul 14, 2023Updated 2 years ago
- R package for Bioconductor submission☆38Dec 8, 2022Updated 3 years ago
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆36Aug 7, 2023Updated 2 years ago
- ☆10May 31, 2022Updated 3 years ago
- Assign genotypes to Salmonella Paratyphi A isolates using their whole-genome data.☆10Mar 6, 2025Updated last year