lydiaMyr / ImmuCellAI-mouseLinks
☆10Updated 5 months ago
Alternatives and similar repositories for ImmuCellAI-mouse
Users that are interested in ImmuCellAI-mouse are comparing it to the libraries listed below
Sorting:
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆14Updated 2 years ago
- Pseudotime Analysis for Bulk Data☆18Updated last year
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Updated 2 years ago
- ☆15Updated 2 years ago
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆24Updated 3 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 2 years ago
- Computational pipeline to process EasySci-RNA data.☆21Updated last year
- ☆11Updated 4 months ago
- ☆18Updated last year
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆26Updated 3 years ago
- ☆60Updated last year
- ☆37Updated 3 years ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆34Updated 5 months ago
- sharing interactive single cell gene expression visualizations from Seurat☆10Updated 2 years ago
- Difference in Intercellular Communication from scRNA-seq data☆22Updated last month
- cell type deconvolution for multi-condition bulk RNA-seq data☆28Updated 3 years ago
- ☆10Updated last month
- ☆15Updated 4 years ago
- R package to use EaSIeR to predict anti-tumor immune response from bulk RNA-seq☆15Updated 10 months ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆39Updated 7 months ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated 2 months ago
- ☆17Updated 2 years ago
- Waelchli-lab / Single-cell-atlas-of-the-human-brain-vasculature-accross-development-adulthood-and-diseaseMolecular atlas of the human brain vasculature accross development, adulthood and disease at the single-cell level☆13Updated last year
- ☆39Updated 2 months ago
- ☆12Updated last year
- ☆32Updated 4 years ago
- ☆12Updated 6 years ago
- deconvolution for RNAseq and bisulfite sequencing☆10Updated 5 years ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆30Updated 5 years ago