lydiaMyr / ImmuCellAI-mouseLinks
☆10Updated 7 months ago
Alternatives and similar repositories for ImmuCellAI-mouse
Users that are interested in ImmuCellAI-mouse are comparing it to the libraries listed below
Sorting:
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆14Updated 2 years ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Updated 2 years ago
- Pseudotime Analysis for Bulk Data☆18Updated last year
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆25Updated 3 years ago
- ☆10Updated 6 months ago
- ☆20Updated 2 years ago
- Dichotomous of innate immune landscape☆17Updated 6 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- ZornLab / Single-cell-transcriptomics-reveals-a-signaling-roadmap-coordinating-endoderm-and-mesoderm-lineageCode and Data Availability for Single cell transcriptomics reveals a signaling roadmap coordinating endoderm and mesoderm lineage diversi…☆10Updated 5 years ago
- ☆16Updated 4 years ago
- ☆18Updated 2 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 9 months ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 3 years ago
- ☆17Updated 4 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆30Updated 3 years ago
- ☆17Updated last year
- ☆62Updated 2 years ago
- R package to use EaSIeR to predict anti-tumor immune response from bulk RNA-seq☆15Updated last month
- single cell sequencing analysis tutorial☆17Updated 6 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated 4 months ago
- ☆33Updated 4 years ago
- A tissue-specific single-cell biological age model☆12Updated 2 years ago
- Difference in Intercellular Communication from scRNA-seq data☆24Updated 3 months ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆30Updated 5 years ago
- ☆39Updated 4 months ago
- ☆15Updated 2 years ago
- ☆25Updated 3 years ago
- deconvolution for RNAseq and bisulfite sequencing☆11Updated 5 years ago
- R package IReNA☆29Updated last year
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆26Updated 3 years ago