☆14Mar 8, 2024Updated last year
Alternatives and similar repositories for cellphylo
Users that are interested in cellphylo are comparing it to the libraries listed below
Sorting:
- ☆15Feb 21, 2023Updated 3 years ago
- ☆16May 25, 2021Updated 4 years ago
- ☆23Feb 12, 2026Updated 2 weeks ago
- ☆23Sep 29, 2025Updated 5 months ago
- CellPhy: accurate and fast probabilistic inference of single-cell phylogenies☆20Jan 8, 2026Updated last month
- Trajectory Inference Based on SNP information.☆24Jun 19, 2024Updated last year
- The scripts used for the analyses in TOME project☆24Nov 28, 2025Updated 3 months ago
- ☆27May 22, 2025Updated 9 months ago
- Detection and classification selective sweep use domain adaptive model☆10Apr 29, 2024Updated last year
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆29Mar 19, 2021Updated 4 years ago
- SAMap: Mapping single-cell RNA sequencing datasets from evolutionarily distant organisms.☆88Dec 26, 2025Updated 2 months ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆33Jan 30, 2026Updated last month
- Radiocarbon calibration command line tool and Haskell module☆11Nov 24, 2025Updated 3 months ago
- heatmap3 is an improved heatmap package. It is completely compatible with the original R function heatmap, and provides some more powerfu…☆10Sep 2, 2021Updated 4 years ago
- ☆13Oct 15, 2024Updated last year
- Detecting Archaic Introgression from Population Genetic Data with S*☆10Jan 28, 2026Updated last month
- ☆87Apr 5, 2021Updated 4 years ago
- A package containing several useful R-functions for reading and plotting the results of Birth-Death Skyline (BDSKY) runs in BEAST2.☆12Nov 28, 2018Updated 7 years ago
- Utilities and distributions for (birth-death) skyline models.☆10Aug 27, 2019Updated 6 years ago
- This pipeline is used to distinguish allotetraploid subgenomes.☆11Apr 8, 2024Updated last year
- AnceTran2.0: R package for transcriptome evolution analysis based on RNA-seq expression data or ChIP-seq TF-binding data☆11May 19, 2019Updated 6 years ago
- ☆13Jun 15, 2024Updated last year
- ☆10Dec 8, 2021Updated 4 years ago
- scPred package for cell type prediction from scRNA-seq data☆98Jan 18, 2024Updated 2 years ago
- R code for writing Beast2 XML (especially morphology/tip-dating)☆11Jun 26, 2024Updated last year
- ☆10Jul 10, 2023Updated 2 years ago
- Sample representation benchmark for single-cell data☆13Aug 11, 2025Updated 6 months ago
- Inferring selection in cancer sequencing data using ABC and population based simulations☆12Jan 31, 2021Updated 5 years ago
- ☆14May 30, 2024Updated last year
- ☆11Sep 22, 2021Updated 4 years ago
- Computer-Assisted Shape Classification of Archaeological Pottery Fragments☆12Feb 9, 2021Updated 5 years ago
- R package MKmisc☆12Sep 10, 2025Updated 5 months ago
- ☆10Oct 30, 2018Updated 7 years ago
- This is a tool for speculation of ancestral allel, calculation of sfs and drawing its bar plot. It is easy-to-use and runing fast. What y…☆11Dec 16, 2022Updated 3 years ago
- CONNET: Accurate Genome Consensus in Assembling Nanopore Sequencing Data via Deep Learning☆11Oct 28, 2022Updated 3 years ago
- ☆12Mar 8, 2024Updated last year
- Github repository for nanoSPLITS manuscript data and R scripts☆10Oct 11, 2024Updated last year
- Using genome-wide markers for polyploid breeding☆12Dec 25, 2025Updated 2 months ago
- ☆14Jan 3, 2024Updated 2 years ago