CellMigrationLab / CellTracksColabLinks
A platform for compiling, analyzing, and exploring tracking data
☆45Updated 4 months ago
Alternatives and similar repositories for CellTracksColab
Users that are interested in CellTracksColab are comparing it to the libraries listed below
Sorting:
- Guides and code for 3D nuclear instance segmentation☆22Updated 2 weeks ago
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆80Updated 2 months ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆17Updated last week
- Imagej toolset to ease hyperstacks visualization and handling☆22Updated 9 months ago
- Lectures for a napari training course☆50Updated last year
- A module with convenience functions for writing Python code that interacts with OMERO.☆45Updated last week
- ☆51Updated 2 months ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆54Updated 8 months ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 3 years ago
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆38Updated last year
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated 3 months ago
- A napari plugin for clustering objects according to their properties.☆87Updated this week
- Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy☆73Updated 3 months ago
- ☆20Updated 4 years ago
- MethodsJ2☆14Updated 3 years ago
- StarDist plugin for napari☆38Updated 10 months ago
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆80Updated last week
- Feature extraction for labeled objects in images using regionprops from scikit-image☆50Updated 2 months ago
- Track and lineage visualization with btrack and Napari☆45Updated 8 months ago
- NEUBIAS Academy @Home: Interactive Bioimage Analysis with Python and Jupyter☆63Updated last year
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- Cell tracking and segmentation software☆120Updated last week
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated 9 months ago
- This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…☆134Updated 5 years ago
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆26Updated 9 months ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- ☆16Updated 11 months ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 7 months ago
- Visualizing feature measurements on label images in napari☆10Updated 11 months ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆43Updated 2 months ago