CellMigrationLab / CellTracksColab
A platform for compiling, analyzing, and exploring tracking data
☆42Updated last week
Alternatives and similar repositories for CellTracksColab:
Users that are interested in CellTracksColab are comparing it to the libraries listed below
- Lectures for a napari training course☆50Updated last year
- Imagej toolset to ease hyperstacks visualization and handling☆22Updated 3 months ago
- ☆44Updated 3 months ago
- Guides and code for 3D nuclear instance segmentation☆20Updated last week
- A module with convenience functions for writing Python code that interacts with OMERO.☆39Updated 2 months ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated 3 months ago
- ☆16Updated 5 months ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated last month
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆15Updated last month
- NEUBIAS Academy @Home: Interactive Bioimage Analysis with Python and Jupyter☆62Updated last year
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆72Updated 3 weeks ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆48Updated 2 months ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆25Updated 7 months ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆22Updated 3 years ago
- A napari plugin for clustering objects according to their properties.☆81Updated last week
- MethodsJ2☆14Updated 2 years ago
- StarDist plugin for napari☆36Updated 4 months ago
- The 2023 version of cellPLATO☆13Updated 2 months ago
- Interactive visualization and sharing of cell tracking data in the browser☆21Updated last week
- Cell tracking and segmentation software☆102Updated last week
- EASI-FISH analysis pipeline for spatial transcriptomics☆33Updated last month
- ☆19Updated 3 years ago
- ☆38Updated 5 months ago
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆22Updated last month
- Deconvolution of widefield microscopy images and generation of point spread functions☆43Updated this week
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆24Updated 3 months ago
- An automatic deep learning algorithm for spot detection in fluorescence microscopy images.☆17Updated this week
- Track and lineage visualization with btrack and Napari☆44Updated 2 months ago
- Generate markdown notebooks from ImageJ Macro☆23Updated 3 years ago
- "Defragmentation: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: workflow…☆15Updated last year