UU-cellbiology / ComDetLinks
ImageJ plugin detecting and colocalizing particles of given size (vesicles, dots, etc on biological microscopy images)
☆19Updated last month
Alternatives and similar repositories for ComDet
Users that are interested in ComDet are comparing it to the libraries listed below
Sorting:
- Create 3D/4D animations using a natural language-based syntax☆60Updated last month
- ImgLib2/BDV implementation of Stitching for large datasets☆74Updated 2 months ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- GPU-accelerated image processing for everyone☆52Updated last year
- Generate markdown notebooks from ImageJ Macro☆25Updated 4 years ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 2 months ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆65Updated last week
- Lectures for a napari training course☆50Updated last year
- Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ☆26Updated 3 years ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆17Updated last week
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 3 years ago
- ImageJ convenience layer for N5☆17Updated last month
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 3 months ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆75Updated last week
- MiC is an ImageJ plugin to compare segmentation masks☆19Updated last month
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 10 months ago
- python tools for BigDataViewer☆22Updated 6 months ago
- PSFj - Know your microscope fluorescence☆21Updated 5 years ago
- A platform for compiling, analyzing, and exploring tracking data☆46Updated 4 months ago
- GDSC Single Molecule Light Microscopy ImageJ Plugins☆16Updated 2 weeks ago
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- Imagej toolset to ease hyperstacks visualization and handling☆22Updated 9 months ago
- Commands and Classes for interfacing between Imaris and Fiji☆12Updated 9 months ago
- Image acquisition software for mesoSPIM light-sheet microscopes.☆42Updated 2 weeks ago
- ☆18Updated 2 months ago
- This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…☆134Updated 5 years ago
- ☆51Updated 2 months ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆50Updated 2 months ago
- A tool for manual pointwise deformable registration using bigdataviewer.☆33Updated last week
- Image correction software for chromatic shifts in fluorescence microscopic images☆24Updated last month