Alternatives and similar repositories for EzColocalization:

Users that are interested in EzColocalization are comparing it to the libraries listed below

• fish-quant / big-fish
  Toolbox for the analysis of smFISH images.
  ☆59Updated last year
• quantixed / imagej-macros
  quantixed FIJI update site
  ☆16Updated 3 months ago
• kwolbachia / Visualization_toolset
  Imagej toolset to ease hyperstacks visualization and handling
  ☆22Updated 6 months ago
• OakesLab / AFT-Alignment_by_Fourier_Transform
  ☆16Updated 9 months ago
• PreibischLab / RS-FISH
  Tool for precise, interactive, fast and scalable FISH spot detection
  ☆49Updated 3 months ago
• CellMigrationLab / CellTracksColab
  A platform for compiling, analyzing, and exploring tracking data
  ☆44Updated last month
• guiwitz / neubias_academy_biapy
  NEUBIAS Academy @Home: Interactive Bioimage Analysis with Python and Jupyter
  ☆62Updated last year
• BIOP / ijl-utilities-wrappers
  Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)
  ☆37Updated 2 months ago
• JaneliaSciComp / multifish
  EASI-FISH analysis pipeline for spatial transcriptomics
  ☆34Updated 5 months ago
• BioImaging-NKI / Foci-analyzer
  ImageJ macro for the analysis of foci (e.g. DNA damage) in nuclei/cells
  ☆16Updated 3 weeks ago
• sofroniewn / napari-training-course
  Lectures for a napari training course
  ☆50Updated last year
• ciccalab / SIMPLI
  SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.
  ☆37Updated last year
• TheJacksonLaboratory / ezomero
  A module with convenience functions for writing Python code that interacts with OMERO.
  ☆44Updated 2 weeks ago
• kreshuklab / go-nuclear
  Guides and code for 3D nuclear instance segmentation
  ☆22Updated last week
• ZhuangLab / MERFISH_analysis
  Matlab software for the analysis of MERFISH data and the construction of MERFISH probes.
  ☆50Updated 3 years ago
• saramcardle / FS2K
  Files associated with the From Samples To Knowledge 2025 QuPath training course
  ☆12Updated 2 weeks ago
• stardist / stardist-imagej
  StarDist plugin for ImageJ
  ☆29Updated 2 years ago
• grishkam / QuickFigures
  QuickFigures is a toolset for creating scientific figures see publication for details
  ☆35Updated last year
• MontpellierRessourcesImagerie / imagej_macros_and_scripts
  ImageJ macros and scripts written at the imaging facility MRI
  ☆33Updated this week
• BiAPoL / imagej-macro-cheat-sheet
  ☆19Updated 3 years ago
• Michael-shannon / cellPLATO
  The 2023 version of cellPLATO
  ☆14Updated 5 months ago
• haesleinhuepf / imagejmacromarkdown
  Generate markdown notebooks from ImageJ Macro
  ☆24Updated 4 years ago
• ariel-waisman / LabelsToROIs
  A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification
  ☆23Updated 3 years ago
• CamachoDejay / teaching-bioimage-analysis-python
  A place to collect information used in lectures, demos, workshops, etc.
  ☆17Updated 7 months ago
• haesleinhuepf / devbio-napari
  ☆49Updated this week
• zjniu / Piscis
  An automatic deep learning algorithm for spot detection in fluorescence microscopy images.
  ☆20Updated 3 months ago
• bioimagebook / bioimagebook.github.io
  An introduction to bioimage analysis - http://bioimagebook.github.io
  ☆67Updated 9 months ago
• oanegros / Blender_for_Biologists_2023
  ☆38Updated 9 months ago
• elgw / deconwolf
  Deconvolution of widefield microscopy images and generation of point spread functions
  ☆46Updated last month
• CellProfiler / tutorials
  CellProfiler tutorial pipelines and images
  ☆93Updated last week