Interactive visualization and sharing of cell tracking data in the browser
☆46Mar 4, 2026Updated 3 weeks ago
Alternatives and similar repositories for inTRACKtive
Users that are interested in inTRACKtive are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A platform for compiling, analyzing, and exploring tracking data☆49Feb 2, 2026Updated last month
- Cell tracking and segmentation software☆174Mar 17, 2026Updated last week
- ShapeEmbedLite: a lightweight self-supervised representation learning model for 2D shape analysis☆21Oct 13, 2025Updated 5 months ago
- Main tasks for the Fractal analytics platform☆23Updated this week
- A web-based, time-series visualizer for tracked segmented data.☆14Mar 13, 2026Updated last week
- Multiple particle tracking in dense 3D particle fields complemented with dynamic regions of interest and trackability inferences for the …☆29Mar 12, 2026Updated last week
- Transformer-based cell tracking for live-cell microscopy☆125Feb 1, 2026Updated last month
- Native Qt interface for Meta's Segment Anything 2 in Images and Videos☆31Sep 26, 2024Updated last year
- Reference implementation of the Graph Exchange File Format☆37Mar 18, 2026Updated last week
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆20Feb 10, 2026Updated last month
- Streaming directly to Zarr on the file system or S3☆29Updated this week
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Mar 16, 2026Updated last week
- 4D reconstruction of developmental trajectories using spherical harmonics☆23Mar 25, 2025Updated last year
- StarDist plugin for napari☆39Aug 24, 2024Updated last year
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30May 1, 2025Updated 10 months ago
- Python package to infer tensions and pressures from 3D microscopy images of embryos and tissues☆12Nov 4, 2025Updated 4 months ago
- End-to-end model for cell segmentation and classification☆22Jan 13, 2025Updated last year
- Official Python implementation of the 'Sparse deconvolution'-v0.3.0☆56Feb 8, 2024Updated 2 years ago
- A napari plugin to view and edit layer metadata☆13Updated this week
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆29Mar 5, 2026Updated 2 weeks ago
- TrackMate is your buddy for your everyday tracking.☆230Feb 9, 2026Updated last month
- Napari plugin for vollseg☆14Jul 16, 2025Updated 8 months ago
- Commands and Classes for interfacing between Imaris and Fiji☆13Sep 30, 2024Updated last year
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Mar 11, 2026Updated 2 weeks ago
- Publically accessible code for DIISCO method☆12Oct 15, 2025Updated 5 months ago
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated last year
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆89Mar 10, 2026Updated 2 weeks ago
- Segment images utilizing pre-trained neural networks as feature extractors☆48Feb 25, 2026Updated last month
- Main repository for DIVE☆17Feb 25, 2022Updated 4 years ago
- Code and data belonging to "Raw data to results: a hands-on introduction and overview of computational analysis for single-molecule local…☆11Mar 7, 2022Updated 4 years ago
- Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy☆90Jan 14, 2026Updated 2 months ago
- A napari plugin for zarr backed OME-NGFF images☆46Mar 17, 2026Updated last week
- dask empowered fast4dreg☆15Mar 11, 2026Updated 2 weeks ago
- DREEM Relates Every Entities' Motion (DREEM). Global Tracking Transformers for biological multi-object tracking.☆15Updated this week
- Interactive image stack viewing in jupyter notebooks based on ipycanvas and ipywidgets☆177Jan 17, 2026Updated 2 months ago
- A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data☆193Mar 17, 2026Updated last week
- ☆12Feb 23, 2026Updated last month
- Updated scripts and pipelines for processing GESTALT data at single-cell resolution☆20May 22, 2021Updated 4 years ago
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆18Apr 8, 2025Updated 11 months ago