☆13Nov 24, 2025Updated 3 months ago
Alternatives and similar repositories for tapenade
Users that are interested in tapenade are comparing it to the libraries listed below
Sorting:
- dask empowered fast4dreg☆15Feb 20, 2026Updated last week
- Efficient graph data structures and algorithms for fast slicing, visualization, and editing☆13Dec 1, 2025Updated 3 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆17Jul 7, 2025Updated 7 months ago
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Feb 4, 2026Updated 3 weeks ago
- A python package for fitting splines.☆23Updated this week
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆25Nov 21, 2024Updated last year
- Guides and code for 3D nuclear instance segmentation☆23Dec 2, 2025Updated 2 months ago
- A napari plugin to view and edit metadata☆13Updated this week
- Computational workflows to assess phototoxicity in live-cell microscopy experiments☆11Sep 15, 2025Updated 5 months ago
- ☆12Updated this week
- An introduction to OME-Zarr for big bioimaging data☆24Updated this week
- A Board Game to teach co-localization analysis☆13Nov 1, 2024Updated last year
- ☆15Updated this week
- Track and lineage visualization with btrack and Napari☆45Sep 29, 2025Updated 5 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Feb 11, 2026Updated 2 weeks ago
- Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, U…☆12Jan 24, 2022Updated 4 years ago
- ☆13Apr 27, 2020Updated 5 years ago
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated 7 months ago
- ImageJ macros and scripts written at the imaging facility MRI☆37Feb 11, 2026Updated 2 weeks ago
- [OBSOLETE] A collection of plugins related to the cell/nucleus tracking, motivated by the Cell Tracking Challenge.☆10Jan 11, 2022Updated 4 years ago
- GPU-accelerated Image Processing library for C++☆16Updated this week
- ☆36Mar 22, 2024Updated last year
- ☆38Dec 5, 2025Updated 2 months ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆20Feb 10, 2026Updated 2 weeks ago
- ☆15Jul 29, 2022Updated 3 years ago
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆18Updated this week
- napari plugin for trackastra☆17Nov 12, 2025Updated 3 months ago
- Content-adaptive storage and processing of large volumetric microscopy data using the Adaptive Particle Representation (APR)☆21Aug 21, 2024Updated last year
- litemind is a Python library designed to empower developers to build sophisticated conversational agents and tools. It provides a flexibl…☆18Feb 14, 2026Updated 2 weeks ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Apr 21, 2025Updated 10 months ago
- ☆21Updated this week
- ☆18May 5, 2023Updated 2 years ago
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆21Jan 9, 2026Updated last month
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Dec 9, 2025Updated 2 months ago
- python tools for BigDataViewer☆22Dec 29, 2024Updated last year
- A minimal dependency napari plugin giving access to scikit-image functions☆23Sep 3, 2025Updated 5 months ago
- A platform for compiling, analyzing, and exploring tracking data☆48Feb 2, 2026Updated 3 weeks ago
- Linking napari layers with Matplotlib plots☆43Feb 2, 2026Updated 3 weeks ago
- A Python toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆106Feb 11, 2026Updated 2 weeks ago