BiAPoL / PoL-BioImage-Analysis-TS-GPU-Accelerated-Image-AnalysisLinks
PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track
☆28Updated last year
Alternatives and similar repositories for PoL-BioImage-Analysis-TS-GPU-Accelerated-Image-Analysis
Users that are interested in PoL-BioImage-Analysis-TS-GPU-Accelerated-Image-Analysis are comparing it to the libraries listed below
Sorting:
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Updated 2 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated this week
- ☆51Updated 9 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30Updated 9 months ago
- ☆12Updated 5 months ago
- A napari plugin for clustering objects according to their properties.☆90Updated 2 weeks ago
- This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.☆16Updated 3 years ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated last year
- ☆15Updated 3 weeks ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆102Updated last week
- A minimal dependency napari plugin giving access to scikit-image functions☆23Updated 5 months ago
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆25Updated last year
- dask empowered fast4dreg☆15Updated last year
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆25Updated 2 months ago
- ☆22Updated 7 months ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆46Updated 2 months ago
- StarDist plugin for napari☆38Updated last year
- Teaching materials and outline for the Pasteur Bioimage Analysis vour☆16Updated 8 months ago
- Guides and code for 3D nuclear instance segmentation☆22Updated 2 months ago
- ☆13Updated 2 months ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆45Updated 9 months ago
- Image reading, metadata management, and image writing for Microscopy images in Python☆112Updated last month
- Multiple file format reading directly into napari using pure Python☆39Updated 3 months ago
- ☆20Updated 3 weeks ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 4 years ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆21Updated 3 months ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated this week
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆17Updated 7 months ago
- ☆12Updated last year
- A template repo used to make new napari plugins☆31Updated last week