BiAPoL / PoL-BioImage-Analysis-TS-GPU-Accelerated-Image-AnalysisLinks
PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track
☆26Updated last year
Alternatives and similar repositories for PoL-BioImage-Analysis-TS-GPU-Accelerated-Image-Analysis
Users that are interested in PoL-BioImage-Analysis-TS-GPU-Accelerated-Image-Analysis are comparing it to the libraries listed below
Sorting:
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated last month
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆14Updated last month
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆26Updated last month
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 6 months ago
- A minimal dependency napari plugin giving access to scikit-image functions☆18Updated last month
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- "Defragmentation: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: workflow…☆15Updated 2 years ago
- This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.☆15Updated 2 years ago
- ☆23Updated 3 weeks ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆17Updated last month
- ☆49Updated last month
- ☆10Updated 2 months ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- ☆15Updated 2 years ago
- dask empowered fast4dreg☆11Updated 6 months ago
- "Defragmentation TS2: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: work…☆10Updated last year
- Visualizing feature measurements on label images in napari☆10Updated 10 months ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated 8 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated last month
- StarDist plugin for napari☆38Updated 9 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆16Updated last month
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆17Updated last month
- Python libraries for loading, running and packaging bioimage.io models☆31Updated last week
- Segment images by pixel classification based on pre-trained convolutional layer feature extraction☆33Updated last month
- Guides and code for 3D nuclear instance segmentation☆22Updated last month
- ☆29Updated last year
- ☆12Updated last year
- Browse your OMERO database from within napari.☆37Updated this week
- ☆12Updated 3 weeks ago
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆23Updated 6 months ago