BiAPoL / PoL-BioImage-Analysis-TS-GPU-Accelerated-Image-Analysis
PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track
☆26Updated 11 months ago
Alternatives and similar repositories for PoL-BioImage-Analysis-TS-GPU-Accelerated-Image-Analysis:
Users that are interested in PoL-BioImage-Analysis-TS-GPU-Accelerated-Image-Analysis are comparing it to the libraries listed below
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆14Updated last week
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆26Updated this week
- This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.☆15Updated 2 years ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated 3 months ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 5 months ago
- ☆10Updated last month
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated 2 weeks ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- "Defragmentation: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: workflow…☆15Updated 2 years ago
- ☆49Updated this week
- ☆23Updated 2 weeks ago
- Process and analyze surfaces using vedo in napari.☆23Updated 11 months ago
- Visualizing feature measurements on label images in napari☆10Updated 9 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆16Updated 3 weeks ago
- dask empowered fast4dreg☆11Updated 5 months ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated 7 months ago
- A minimal dependency napari plugin giving access to scikit-image functions☆17Updated last week
- ☆12Updated last year
- ☆17Updated this week
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆16Updated last week
- StarDist plugin for napari☆38Updated 8 months ago
- Browse your OMERO database from within napari.☆36Updated this week
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆16Updated this week
- A template repo used to make new napari plugins☆20Updated last week
- Python libraries for loading, running and packaging bioimage.io models☆31Updated last month
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆16Updated last week
- "Defragmentation TS2: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: work…☆10Updated last year
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆23Updated 5 months ago
- Imagej toolset to ease hyperstacks visualization and handling☆22Updated 6 months ago
- ☆15Updated 2 years ago