Commands and Classes for interfacing between Imaris and Fiji
☆13Sep 1, 2026Updated 2 months ago
Alternatives and similar repositories for EasyXT-FIJI
Users that are interested in EasyXT-FIJI are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆22Aug 24, 2026Updated 2 months ago
- Linearize your support queue☆10Oct 27, 2026Updated last week
- Conversion between spatial transformations of various formats / parametrizations☆10May 15, 2026Updated 5 months ago
- Fiji macro for cutting confocal stacks at various depths relative to surface signal☆10Sep 28, 2020Updated 6 years ago
- MultiModal Big Image Data Sharing and Exploration☆20Jan 13, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Shell scripts for scientific projects written in Java☆17Oct 21, 2026Updated 2 weeks ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆31Updated this week
- The framework for quantification of neuronal anatomy☆64Updated this week
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆62Oct 18, 2026Updated 2 weeks ago
- simple standalone BigDataViewer for multiple N5 (or HDF5) datasets☆12Mar 6, 2026Updated 8 months ago
- Simple Maven project for an ImageJ2 command☆34Oct 24, 2026Updated last week
- Foundational libraries for scientific Java applications 🧱☆11Oct 29, 2026Updated last week
- FLIM-focused framework for multimodal single-cell imaging: extract features from FLIM and QPI data, then analyze any tabular dataset inte…☆19Updated this week
- Create 3D/4D animations using a natural language-based syntax☆60Jun 6, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Solve bio-image analysis puzzles!☆13Apr 26, 2025Updated last year
- ☆24Sep 13, 2025Updated last year
- Helpers to use BigDataViewer as a quick visualization tool in other projects.☆26Jun 13, 2024Updated 2 years ago
- Maven project to easily connect to OMERO.☆11Oct 1, 2026Updated last month
- Algorithmic and Utility Extensions for the Imaris Program☆21Aug 28, 2026Updated 2 months ago
- Whole slide image registration through wsireg in napari.☆12Apr 21, 2023Updated 3 years ago
- Java implementation of the Zarr Specification☆24Updated this week
- Most of us study and work at the Bio-image Analysis Technology Development group at the DFG Cluster of Excellence “Physics of Life” at th…☆16Jun 27, 2025Updated last year
- Launch Programs Your Way! 🍔☆14Jan 2, 2026Updated 10 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Dimensionality reduction (UMAP, t-SNE, PCA) for ImageJ/Fiji☆12May 6, 2025Updated last year
- A tool for manual pointwise deformable registration using bigdataviewer.☆37Oct 30, 2026Updated last week
- A Micro-Manager plugin that loads easily reconfigurable user interfaces.☆11Aug 30, 2023Updated 3 years ago
- ImageJ+ImageJ2 compatibility layer☆17Sep 29, 2026Updated last month
- Advanced Tool for Labeling And Segmentation☆41Oct 21, 2024Updated 2 years ago
- some useful function to get Label from ROIs and vice versa , and more!☆11May 3, 2023Updated 3 years ago
- ImgLib2-based viewer for registered SPIM stacks and more☆46Updated this week
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆74Updated this week
- Various parts made for fluorescence microscopy + optics work☆19Jul 22, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A collection of tools for the analysis of biological data☆12Mar 22, 2016Updated 10 years ago
- ☆17Aug 3, 2026Updated 3 months ago
- ImageJ plugin for the fast generation of microscopy PSF☆11Oct 28, 2025Updated last year
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆19Oct 20, 2026Updated 2 weeks ago
- Visual ImageJ Macro editing in a node-base editor featuring ImageJ☆18Mar 28, 2020Updated 6 years ago
- MLOT - A machine learning algorithm, written for use with MATLAB, in order to track in 3D moving particles based on a training data set. …☆12Dec 24, 2018Updated 7 years ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Dec 9, 2025Updated 10 months ago