bigdataviewer / bigdataviewer-playground
☆19Updated last month
Alternatives and similar repositories for bigdataviewer-playground:
Users that are interested in bigdataviewer-playground are comparing it to the libraries listed below
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated last year
- python tools for BigDataViewer☆21Updated 2 weeks ago
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Updated last year
- The repository of NEUBIAS textbook 2021☆10Updated 2 years ago
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆33Updated 3 weeks ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆15Updated last month
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆22Updated 3 years ago
- ☆19Updated 3 years ago
- ilastik plugin for napari☆13Updated 9 months ago
- MultiModal Big Image Data Sharing and Exploration☆14Updated 2 years ago
- Running compute-intense parts of BigStitcher distributed☆21Updated last month
- ☆10Updated last month
- Commands and Classes for interfacing between Imaris and Fiji☆12Updated 3 months ago
- Little OBjects Segmentation and Tracking EnviRonment☆9Updated 4 years ago
- ☆12Updated 4 years ago
- ImageJ convenience layer for N5☆16Updated last month
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated last month
- Visualizing feature measurements on label images in napari☆10Updated 5 months ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated last month
- Generate markdown notebooks from ImageJ Macro☆23Updated 3 years ago
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆24Updated 3 months ago
- MethodsJ2☆14Updated 2 years ago
- Fiji macro for cutting confocal stacks at various depths relative to surface signal☆10Updated 4 years ago
- Imagej toolset to ease hyperstacks visualization and handling☆22Updated 3 months ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 4 months ago
- ☆36Updated 3 weeks ago
- Code for simulating a multi-view acquisition including attenuation, convolution, reduced sampling and poission noise☆12Updated 2 years ago
- my first baby steps with Napari☆10Updated 5 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆53Updated 2 years ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆15Updated last month