napari widgets for start-to-finish batch processing
☆15Apr 1, 2026Updated last week
Alternatives and similar repositories for napari-ndev
Users that are interested in napari-ndev are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SciCount is tool focused on counting and classifying of objects in image-like data and scientific images, with training and example datas…☆11Oct 24, 2023Updated 2 years ago
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Mar 30, 2026Updated 2 weeks ago
- A template repo used to make new napari plugins☆36Apr 2, 2026Updated last week
- ☆15Updated this week
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆29Updated this week
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Dec 9, 2025Updated 4 months ago
- ☆18Oct 12, 2019Updated 6 years ago
- Rust extension module for FIJI-like colormapping and channel blending☆19Mar 31, 2026Updated last week
- A napari plugin to view and edit layer metadata☆13Updated this week
- imageC / EVAnalyzer2 - High throughput biological image processor☆10Mar 23, 2026Updated 3 weeks ago
- Teaching materials and outline for the Pasteur Bioimage Analysis vour☆16Jun 2, 2025Updated 10 months ago
- GPU-accelerated Image Processing library for C++☆16Updated this week
- git-bob uses AI to solve Github-issues. It runs inside the Github CI, no need to install anything on your computer.☆62Sep 15, 2025Updated 6 months ago
- Visualizing feature measurements on label images in napari☆10Jul 24, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Computational workflows to assess phototoxicity in live-cell microscopy experiments☆11Sep 15, 2025Updated 6 months ago
- ilastik plugin for napari☆15Mar 2, 2026Updated last month
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆18Updated this week
- Course on Deep Learning for imaging using PyTorch☆13Feb 2, 2022Updated 4 years ago
- ☆15Jul 29, 2022Updated 3 years ago
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆39Jul 9, 2024Updated last year
- Python program to generate NetworkX graphs from segmented images.☆14Apr 14, 2023Updated 2 years ago
- QuPath extension for Cellsparse☆19May 6, 2025Updated 11 months ago
- Use Napari Viewer to display CZI images☆11May 25, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆21Apr 3, 2026Updated last week
- GPU-accelerated Image Processing library for Python☆55Updated this week
- This repository provides a collection of tools to simplify reading CZI (Carl Zeiss Image) pixel and metadata in Python.☆21Updated this week
- Use ImageJ functionality from napari☆34Jan 2, 2026Updated 3 months ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆20Feb 10, 2026Updated 2 months ago
- Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, U…☆13Jan 24, 2022Updated 4 years ago
- An introduction to bioimage analysis - http://bioimagebook.github.io☆76Feb 5, 2026Updated 2 months ago
- reimplement cellpose without gui☆11Mar 18, 2021Updated 5 years ago
- A napari plugin to analysis point spread functions.☆12Mar 28, 2025Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Oct 30, 2017Updated 8 years ago
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆40Mar 26, 2026Updated 2 weeks ago
- QuST: QuPath Extension for Integrative Whole Slide Image and Spatial Transcriptomics Analysis☆34Jun 22, 2025Updated 9 months ago
- Segment images utilizing pre-trained neural networks as feature extractors☆51Apr 2, 2026Updated last week
- ☆30Jan 19, 2026Updated 2 months ago
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆55Nov 13, 2025Updated 4 months ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Sep 26, 2024Updated last year