Alternatives and similar repositories for BatchConvert

Users that are interested in BatchConvert are comparing it to the libraries listed below

• constantinpape / pybdv
  python tools for BigDataViewer
  ☆22Updated last year
• tlambert03 / ome-types
  native Python dataclasses for the OME data model
  ☆65Updated last week
• BioVisionCenter / ngio
  Ngio is a Python library to streamline OME-Zarr image analysis workflows.
  ☆37Updated last week
• ome / napari-ome-zarr
  A napari plugin for zarr backed OME-NGFF images
  ☆42Updated last month
• multiview-stitcher / multiview-stitcher
  A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.
  ☆101Updated last week
• krentzd / napari-clemreg
  An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)
  ☆20Updated 2 months ago
• NEUBIAS / training-resources
  Resources for teaching/preparing to teach bioimage analysis
  ☆58Updated last week
• haesleinhuepf / awesome-napari-plugins-that-are-not-on-the-napari-hub-yet
  ☆25Updated 2 years ago
• TheJacksonLaboratory / ezomero
  A module with convenience functions for writing Python code that interacts with OMERO.
  ☆46Updated last month
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆59Updated 6 months ago
• lowe-lab-ucl / arboretum
  Track and lineage visualization with btrack and Napari
  ☆45Updated 3 months ago
• ome / napari-omero
  Browse your OMERO database from within napari.
  ☆40Updated last week
• napari-threedee / napari-threedee
  A 3D interactivity toolbox for napari
  ☆37Updated 6 months ago
• multiview-stitcher / napari-stitcher
  A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher
  ☆17Updated 6 months ago
• CamachoDejay / teaching-bioimage-analysis-python
  A place to collect information used in lectures, demos, workshops, etc.
  ☆17Updated last year
• jluethi / napari-feature-visualization
  Visualizing feature measurements on label images in napari
  ☆10Updated last year
• fmicompbio / ez_zarr
  GIve easy, high-level access to ome-zarr fileset
  ☆22Updated 3 months ago
• NFDI4BIOIMAGE / training
  ☆14Updated this week
• guiwitz / napari-skimage
  A minimal dependency napari plugin giving access to scikit-image functions
  ☆23Updated 4 months ago
• fractal-analytics-platform / fractal-client
  Command-line client for Fractal
  ☆47Updated this week
• UU-cellbiology / BigTrace
  FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets
  ☆29Updated last month
• ilastik / ilastik-napari
  ilastik plugin for napari
  ☆14Updated last month
• clEsperanto / pyclesperanto
  GPU-accelerated Image Processing library for Python
  ☆53Updated 2 weeks ago
• haesleinhuepf / napari-accelerated-pixel-and-object-classification
  GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.
  ☆45Updated 8 months ago
• mobie / mobie-viewer-fiji
  ☆41Updated 3 weeks ago
• czbiohub-sf / iohub
  Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata
  ☆48Updated last week
• mobie / mobie
  MultiModal Big Image Data Sharing and Exploration
  ☆18Updated 3 years ago
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆25Updated last year
• True-North-Intelligent-Algorithms / notebooks-and-napari-widgets-for-dl
  A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.
  ☆18Updated last month
• BioImageTools / ome-zarr-image-analysis-nextflow
  Basic example of using OME-Zarr in a Nextflow pipeline
  ☆19Updated 6 months ago