Interactive image stack viewing in jupyter notebooks based on ipycanvas and ipywidgets
☆183Jul 30, 2026Updated last week
Alternatives and similar repositories for stackview
Users that are interested in stackview are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A napari plugin for clustering objects according to their properties.☆90Aug 3, 2026Updated last week
- BIA Bob is a Jupyter+LLM-based assistant for interacting with image data and for working on Bio-image Analysis tasks.☆136Jul 28, 2026Updated last week
- Accelerated Pixel and Object Classifiers (APOC)☆62Apr 24, 2026Updated 3 months ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Sep 26, 2024Updated last year
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆46May 1, 2025Updated last year
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- A napari plugin to view and edit layer metadata☆13Updated this week
- Image reading, metadata management, and image writing for Microscopy images in Python☆126Updated this week
- A platform for compiling, analyzing, and exploring tracking data☆50Feb 2, 2026Updated 6 months ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Jun 5, 2024Updated 2 years ago
- ☆12Feb 23, 2026Updated 5 months ago
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated 2 years ago
- Multiple file format reading directly into napari using pure Python☆38Oct 15, 2025Updated 9 months ago
- GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data☆244Apr 24, 2026Updated 3 months ago
- A recast of cell segmentation models built on the Burn deep learning framework.☆23Jul 30, 2026Updated last week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A fully scalable robust image feature extraction library.☆29Updated this week
- Fusing image tiles with dask array's map_blocks☆31Feb 27, 2024Updated 2 years ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆74Sep 29, 2024Updated last year
- ☆52May 1, 2025Updated last year
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Dec 9, 2025Updated 8 months ago
- Segment Anything for Microscopy☆708Updated this week
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Jul 26, 2026Updated 2 weeks ago
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆15Jul 30, 2026Updated last week
- Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more☆158Jan 11, 2026Updated 6 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆22Aug 17, 2023Updated 2 years ago
- ilastik plugin for napari☆15Mar 2, 2026Updated 5 months ago
- Speed up coding/extending image analysis in Python.☆37May 9, 2026Updated 3 months ago
- Linking napari layers with Matplotlib plots☆45Jul 1, 2026Updated last month
- GPU-accelerated Image Processing library for Python☆63Updated this week
- Gamified image segmentation quality estimation☆19May 1, 2025Updated last year
- Use ImageJ functionality from napari☆34Jun 17, 2026Updated last month
- Quickly find the affine matrix mapping one image to another using manual correspondence points annotation☆23Aug 6, 2025Updated last year
- Automated batch processing of cell and tissue microscopy image data in Napari☆22Updated this week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- A fast and open-source scientific image processing and algorithm library.☆16Jul 31, 2026Updated last week
- Generate multifunctional and macro recordable GUIs from Python classes☆46Updated this week
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆27Sep 26, 2024Updated last year
- Open source Python library for building bioimage analysis pipelines☆209Updated this week
- A napari plugin for zarr backed OME-NGFF images☆54Jul 31, 2026Updated last week
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆39Jul 9, 2024Updated 2 years ago
- ☆24May 16, 2023Updated 3 years ago