kwolbachia / Visualization_toolsetLinks
Imagej toolset to ease hyperstacks visualization and handling
☆23Updated last year
Alternatives and similar repositories for Visualization_toolset
Users that are interested in Visualization_toolset are comparing it to the libraries listed below
Sorting:
- Generate markdown notebooks from ImageJ Macro☆26Updated 4 years ago
- ☆51Updated 9 months ago
- A platform for compiling, analyzing, and exploring tracking data☆48Updated this week
- ☆13Updated 2 months ago
- Lectures for a napari training course☆50Updated 2 years ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 4 years ago
- Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, U…☆12Updated 4 years ago
- Denoising via adaptive binning.☆13Updated last month
- A module with convenience functions for writing Python code that interacts with OMERO.☆46Updated 2 months ago
- quantixed FIJI update site☆17Updated 3 weeks ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆17Updated 2 months ago
- ☆20Updated 4 years ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Updated last month
- some useful function to get Label from ROIs and vice versa , and more!☆11Updated 2 years ago
- A Board Game to teach co-localization analysis☆13Updated last year
- Z-stack Depth Colorcode ImageJ FIJI plugin☆25Updated 3 months ago
- ☆16Updated 2 years ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated last year
- ☆10Updated last year
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆40Updated last month
- Guides and code for 3D nuclear instance segmentation☆22Updated 2 months ago
- ☆16Updated last year
- ☆13Updated 5 years ago
- A minimal dependency napari plugin giving access to scikit-image functions☆23Updated 5 months ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆25Updated 2 months ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆55Updated 9 months ago
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆39Updated last year
- A napari plugin for clustering objects according to their properties.☆90Updated last week
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Updated 8 years ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆102Updated this week