Imagej toolset to ease hyperstacks visualization and handling
☆23Feb 9, 2026Updated 4 months ago
Alternatives and similar repositories for Visualization_toolset
Users that are interested in Visualization_toolset are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Nov 29, 2024Updated last year
- Smooth 2D manifold extraction from 3D image stack☆22Mar 18, 2018Updated 8 years ago
- An ImageJ/Fiji plugin designed to effortlessly integrate Segment-Anything models (SAMs) without code.☆92Mar 24, 2026Updated 2 months ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆25Nov 6, 2025Updated 7 months ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Sep 26, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- BIA Bob is a Jupyter+LLM-based assistant for interacting with image data and for working on Bio-image Analysis tasks.☆132Aug 7, 2025Updated 10 months ago
- Handmade ImageJ / Fiji LUTs for microscopy, scientific good visualization and art.☆14Jan 9, 2025Updated last year
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆39Jul 9, 2024Updated last year
- ☆14Jan 25, 2024Updated 2 years ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Sep 11, 2021Updated 4 years ago
- QuPath extension for Cellsparse☆19May 6, 2025Updated last year
- ☆52May 1, 2025Updated last year
- SciCount is tool focused on counting and classifying of objects in image-like data and scientific images, with training and example datas…☆11Oct 24, 2023Updated 2 years ago
- ☆20May 1, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Denoising via adaptive binning.☆13Jan 6, 2026Updated 5 months ago
- A Micro-Manager plugin that loads easily reconfigurable user interfaces.☆11Aug 30, 2023Updated 2 years ago
- GPU-accelerated image processing for everyone☆58Jul 4, 2024Updated last year
- A self-explanatory, hands-on intro to bioimage analysis in python. Slightly outdated but still much liked by learners.☆99Feb 17, 2023Updated 3 years ago
- quantixed FIJI update site☆17Apr 15, 2026Updated last month
- ☆22May 12, 2021Updated 5 years ago
- Liquid handling robot for in situ serial multiplexing☆19Apr 7, 2017Updated 9 years ago
- A curated list of software, tools, pipelines, plugins etc. for image analysis related to biological questions.☆186Mar 14, 2026Updated 2 months ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆20Feb 10, 2026Updated 3 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Open source SMLM microscope designs☆13May 31, 2023Updated 3 years ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆31May 28, 2026Updated last week
- A minimal dependency napari plugin giving access to scikit-image functions☆23Mar 26, 2026Updated 2 months ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Dec 9, 2025Updated 6 months ago
- Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more☆157Jan 11, 2026Updated 4 months ago
- A collection of LUTs for ImageJ/Fiji☆77Jun 20, 2020Updated 5 years ago
- napari widgets for start-to-finish batch processing☆15Jun 1, 2026Updated last week
- A napari plugin for making image annotation using feature space of vision transformers and Random Forest classifier☆23Nov 24, 2025Updated 6 months ago
- ☆17Nov 3, 2023Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- CMCI textbook 2, for ImageJ macro course☆19Nov 6, 2017Updated 8 years ago
- Loading and handling microscopy data in blender☆152May 27, 2026Updated last week
- A platform for compiling, analyzing, and exploring tracking data☆50Feb 2, 2026Updated 4 months ago
- clEsperanto - GPU-accelerated image processing across languages and platforms☆11Feb 13, 2021Updated 5 years ago
- ☆12Feb 5, 2026Updated 4 months ago
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆10Dec 17, 2021Updated 4 years ago
- ImageJ macros to run Cellpose from Fiji (using the plugin from BIOP-EPFL) and to match nuclei and cell body label maps.☆20Mar 11, 2025Updated last year