kwolbachia / Visualization_toolset
Imagej toolset to ease hyperstacks visualization and handling
☆22Updated 4 months ago
Alternatives and similar repositories for Visualization_toolset:
Users that are interested in Visualization_toolset are comparing it to the libraries listed below
- ☆19Updated 3 years ago
- A platform for compiling, analyzing, and exploring tracking data☆43Updated last month
- ☆46Updated 4 months ago
- Generate markdown notebooks from ImageJ Macro☆24Updated 3 years ago
- ☆10Updated 2 months ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated last year
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆12Updated this week
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆15Updated 2 weeks ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆22Updated 3 years ago
- quantixed FIJI update site☆16Updated last month
- A module with convenience functions for writing Python code that interacts with OMERO.☆41Updated 3 months ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated 4 months ago
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆34Updated last month
- ☆15Updated 6 months ago
- ☆12Updated 9 months ago
- Lectures for a napari training course☆50Updated last year
- A Board Game to teach co-localization analysis☆12Updated 3 months ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 2 months ago
- Guides and code for 3D nuclear instance segmentation☆20Updated last month
- Browse your OMERO database from within napari.☆35Updated last week
- Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, U…☆12Updated 3 years ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- Denoising via adaptive binning.☆12Updated 7 months ago
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Updated 7 years ago
- ☆17Updated 2 years ago
- "Defragmentation: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: workflow…☆15Updated last year
- ☆15Updated 2 years ago
- Visualizing feature measurements on label images in napari☆10Updated 6 months ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆25Updated 8 months ago
- A minimal dependency napari plugin giving access to scikit-image functions☆17Updated 5 months ago