Alternatives and similar repositories for Reseqtools

Users that are interested in Reseqtools are comparing it to the libraries listed below

• BGI-shenzhen / VCF2Dis
  VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Forma…
  ☆99Updated 2 months ago
• BGI-shenzhen / RectChr
  Multi-level visualization of genomic statistical variables on rectangular chromosomes
  ☆102Updated last month
• xuzhougeng / Genomic_tools
  Genomic related tools
  ☆72Updated 4 years ago
• xiaochuanle / MECAT
  MECAT: an ultra-fast mapping, error correction and de novo assembly tool for single-molecule sequencing reads
  ☆111Updated 5 years ago
• xiaochuanle / MECAT2
  ☆71Updated 5 years ago
• PacificBiosciences / pb-assembly
  PacBio Assembly Tool Suite: Reads in ⇨ Assembly out
  ☆118Updated 5 years ago
• JinfengChen / Scripts
  ☆76Updated 5 years ago
• fbemm / onefc-oneasm
  Simple code snippets and data for the One Flowcell - One Assembly study
  ☆35Updated 7 years ago
• YuSugihara / MutMap
  MutMap pipeline to identify causative mutations responsible for a phenotype
  ☆61Updated 9 months ago
• yjx1217 / RMRB
  This is an archive version of old RepBase library (v20170127) for RepeatMasker.
  ☆37Updated 4 years ago
• hardingnj / xpclr
  Code to compute the XP-CLR statistic to infer natural selection
  ☆100Updated 3 years ago
• irusri / Extract-intron-from-gff3
  This script will extract the intron feature gff3 and sequence from gene_exon gff3 and fasta file.
  ☆33Updated 7 years ago
• dentearl / mafTools
  Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.
  ☆109Updated 3 years ago
• fanagislab / GCE
  GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…
  ☆53Updated 5 years ago
• hyphaltip / genome-scripts
  Genome Scripts used in fungal comparative genomics
  ☆66Updated 5 years ago
• arzwa / wgd
  Python package and CLI for whole-genome duplication related analyses. **This package is deprecated in favor of** https://github.com/heche…
  ☆86Updated 2 years ago
• HuiyangYu / PanDepth
  An ultra-fast and efficient genomic tool for coverage calculation
  ☆161Updated 7 months ago
• tangerzhang / ALLHiC
  ALLHiC: phasing and scaffolding polyploid genomes based on Hi-C data
  ☆177Updated last year
• parklab / xTea
  Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics
  ☆117Updated 4 months ago
• shendurelab / LACHESIS
  The LACHESIS software, as described in Nature Biotechnology (http://dx.doi.org/10.1038/nbt.2727)
  ☆80Updated 7 years ago
• EVidenceModeler / EVidenceModeler
  source code for EVM
  ☆118Updated 11 months ago
• starskyzheng / panpop
  Application of pan-genome for population
  ☆115Updated 3 weeks ago
• sujaikumar / assemblage
  Tools for working with second gen assemblies, fasta sequences, etc
  ☆93Updated 9 years ago
• PacificBiosciences / pb-CpG-tools
  Collection of tools for the analysis of CpG data
  ☆97Updated 4 months ago
• steuernb / NLR-Annotator
  NLR-Annotator upload
  ☆73Updated 2 years ago
• shizhuoxing / BGI-Full-Length-RNA-Analysis-Pipeline
  Full-Length RNA Analysis pipeline developted by BGI RD group.
  ☆19Updated 3 years ago
• chenlianfu / geta
  ☆83Updated last year
• wurmlab / flo
  Same species annotation lift over pipeline.
  ☆98Updated 2 years ago
• eblerjana / pangenie
  Pangenome-based genome inference
  ☆149Updated last week
• voichek / kmersGWAS
  A library for running k-mers based GWAS
  ☆119Updated last year