A battery of methylation tools for PacBio HiFi reads
☆52Jun 2, 2026Updated last month
Alternatives and similar repositories for MethBat
Users that are interested in MethBat are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Collection of tools for the analysis of CpG data☆111Jul 9, 2025Updated 11 months ago
- Joint structural variant and copy number variant caller for HiFi sequencing data☆78Nov 4, 2025Updated 8 months ago
- Figures for the CHM13 T2T SD paper.☆12Sep 12, 2021Updated 4 years ago
- TRGT Repeat expansion summary☆10Apr 10, 2023Updated 3 years ago
- Phasing reads with secondary alignments☆22Nov 30, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- PAF (pairwise alignment format) validator based on extended CIGAR strings☆15Aug 10, 2025Updated 10 months ago
- ☆32Jun 18, 2026Updated 2 weeks ago
- The complete sequence of a Chinese individual☆13Oct 8, 2024Updated last year
- Transfer HiFi read mappings from their own assembly contigs to a standard reference☆39Dec 30, 2025Updated 6 months ago
- ☆18Jan 29, 2025Updated last year
- Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads☆87May 27, 2026Updated last month
- A complete diploid human genome☆152Jun 23, 2026Updated last week
- Telomere local assembly, Improved whole genome polish, and Plastid assembly☆22Apr 25, 2025Updated last year
- Identifying large scale inversions between two genomes by mapping genome 1's unique kmers onto genome 2.☆10Jun 6, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Catalogue of pairwise alignment algorithms and benchmarks☆25Jan 6, 2026Updated 5 months ago
- ☆42Oct 6, 2025Updated 8 months ago
- Transformer-based sequence correction method for genome assembly polishing☆104Mar 11, 2025Updated last year
- Detecting DNA methylation from PacBio CCS reads☆83Apr 8, 2025Updated last year
- ☆44Dec 29, 2025Updated 6 months ago
- A gap-closing software tool that uses long reads to enhance genome assembly.☆24Apr 25, 2024Updated 2 years ago
- De novo chromosome-level scaffolding and phasing tool using Hi-C☆30Nov 23, 2025Updated 7 months ago
- Call select base modifications in PacBio HiFi reads☆18May 29, 2026Updated last month
- Structural Variants Assessment Based on Haplotype-resolved Assemblies☆21Apr 28, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Code repository for the T2T-Y paper☆24Jul 11, 2023Updated 2 years ago
- Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing☆40May 19, 2026Updated last month
- Dividing heterogeneous long-read sequencing into groups with de Bruijn graphs☆44Sep 29, 2025Updated 9 months ago
- A pipeline for identifying conserved topologically associating domain boundaries among multiple species.☆16Jun 17, 2025Updated last year
- base-accurate DNA sequence alignments using WFA and mashmap3☆217Jun 21, 2026Updated last week
- Tandem repeat expansion detection or genotyping from long-read alignments☆162Mar 25, 2026Updated 3 months ago
- base-level dotplots from PAF alignments☆35Sep 18, 2025Updated 9 months ago
- A collection of softwares to handle and model PacBio kinetic signal data and predict epigenetics modifications.☆10Mar 4, 2024Updated 2 years ago
- Kmer Analysis of Pileups for Genotyping☆40Mar 6, 2026Updated 3 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Location of public benchmarking; primarily final results☆18Feb 17, 2025Updated last year
- ☆11Dec 9, 2022Updated 3 years ago
- ☆195Feb 10, 2026Updated 4 months ago
- bioinformatics toolkit in rust☆107May 14, 2026Updated last month
- ☆12Oct 13, 2021Updated 4 years ago
- Genome browser hub for the T2T genomes and resources☆28Apr 7, 2026Updated 2 months ago
- De Bruijn graph construction for large k.☆17Aug 31, 2021Updated 4 years ago