A battery of methylation tools for PacBio HiFi reads
☆52Jul 15, 2026Updated last week
Alternatives and similar repositories for MethBat
Users that are interested in MethBat are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Joint structural variant and copy number variant caller for HiFi sequencing data☆79Nov 4, 2025Updated 8 months ago
- Collection of tools for the analysis of CpG data☆113Jul 9, 2025Updated last year
- ☆19Jul 15, 2026Updated last week
- Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads☆87May 27, 2026Updated last month
- Transfer HiFi read mappings from their own assembly contigs to a standard reference☆39Dec 30, 2025Updated 6 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- TRGT Repeat expansion summary☆10Apr 10, 2023Updated 3 years ago
- A tool for sniffing out the differences in vari-Ants☆44Apr 7, 2026Updated 3 months ago
- ☆32Jun 18, 2026Updated last month
- Phasing reads with secondary alignments☆22Nov 30, 2024Updated last year
- A phase-aware pharmacogenomic diplotyper for PacBio datasets☆23Jun 22, 2026Updated last month
- Dividing heterogeneous long-read sequencing into groups with de Bruijn graphs☆44Updated this week
- Copy number variant caller and depth visualization utility for PacBio HiFi reads☆49Oct 22, 2024Updated last year
- Tools for fiberseq data written in rust.☆69Updated this week
- A complete diploid human genome☆154Jun 23, 2026Updated last month
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- HiFi-based caller for highly similar paralogous genes☆72Updated this week
- Tumor-normal variant calling workflow using HiFi reads☆31Mar 4, 2026Updated 4 months ago
- Figures for the CHM13 T2T SD paper.☆12Sep 12, 2021Updated 4 years ago
- SV calling for diploid assemblies☆32Mar 22, 2024Updated 2 years ago
- MethPhaser: methylation-based haplotype phasing of human genomes☆56Mar 5, 2025Updated last year
- De novo tandem repeat calling from PacBio HiFi data☆19Dec 5, 2025Updated 7 months ago
- PAF (pairwise alignment format) validator based on extended CIGAR strings☆15Aug 10, 2025Updated 11 months ago
- The complete sequence of a Chinese individual☆14Oct 8, 2024Updated last year
- bioinformatics toolkit in rust☆107Jul 16, 2026Updated last week
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆27Nov 14, 2025Updated 8 months ago
- ☆44Dec 29, 2025Updated 6 months ago
- ☆18Jan 29, 2025Updated last year
- Complex structural variant visualization for HiFi sequencing data☆49Oct 24, 2025Updated 9 months ago
- Fast Tandem Repeat Finder☆16Jun 17, 2026Updated last month
- Structural Variants Assessment Based on Haplotype-resolved Assemblies☆21Apr 28, 2023Updated 3 years ago
- Telomere local assembly, Improved whole genome polish, and Plastid assembly☆22Apr 25, 2025Updated last year
- Genome Assembly 102☆18Apr 23, 2025Updated last year
- Call select base modifications in PacBio HiFi reads☆18May 29, 2026Updated last month
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Tandem repeat genotyping with long reads☆38Sep 23, 2025Updated 10 months ago
- Short Tandem Repeat disease loci resource☆29Updated this week
- Haplotype-specific somatic copy number aberrations/profiling from long reads sequencing data☆82Jul 17, 2026Updated last week
- Benchmarking variant calling in polyploids☆16Nov 26, 2021Updated 4 years ago
- Identifying large scale inversions between two genomes by mapping genome 1's unique kmers onto genome 2.☆10Jun 6, 2025Updated last year
- Catalogue of pairwise alignment algorithms and benchmarks☆26Jan 6, 2026Updated 6 months ago
- LongcallD: joint calling and phasing of small, structural and mosaic variants from long reads☆107Jun 25, 2026Updated last month