BGI-Qingdao / MetaTrass
Metagenomics Taxonomic Reads Assembly Single-Species
☆16Updated last year
Alternatives and similar repositories for MetaTrass:
Users that are interested in MetaTrass are comparing it to the libraries listed below
- Evolutionary Transcriptomics with R☆43Updated this week
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆33Updated last year
- Workflows for metagenomic sequence data processing and analysis.☆17Updated 5 years ago
- ☆32Updated last year
- HoCoRT - Remove specific organisms from sequencing reads☆17Updated 4 months ago
- PanPhlAn is a strain-level metagenomic profiling tool for identifying the gene composition of individual strains in metagenomic samples☆45Updated last year
- catalog for long-read sequencing tools☆32Updated 2 years ago
- Metagenomics Workshop☆28Updated 8 years ago
- mBin: a methylation-based binning framework for metagenomic SMRT sequencing reads☆25Updated 2 years ago
- Analysing Metagenomic Species (MGS)☆41Updated 4 years ago
- ☆22Updated 5 years ago
- This repository contains computer codes for main analyses of the manuscript titled 'Multi-omic Landscape of Airway Microbe-Host Interacti…☆31Updated 2 years ago
- Repository for scripts and resources used for metagenomics with Nanopore, PacBio and Illumina sequencing☆21Updated 2 years ago
- ☆29Updated 4 years ago
- A shiny package for microbiome functional enrichment analysis☆37Updated 2 weeks ago
- Scripts and data for Duran & Thiergart et al. Cell, 2018☆24Updated 6 years ago
- Error correction of ONT transcript reads☆58Updated last year
- Snakemake workflow for metagenomic classification with Kraken2☆65Updated last year
- scripts for sequence and feature conversion, annotation, analysis ...☆27Updated last month
- De novo annotation of young retrotransposons☆48Updated 3 years ago
- web documentation for Trinotate☆48Updated 2 years ago
- PATO is a R package designed to analyze pangenomes (set of genomes) intra or inter species.☆58Updated last year
- Repository of common bioinformatics scripts☆39Updated 3 years ago
- perSVade: personalized Structural Variation detection☆39Updated 2 months ago
- Documentation for Evolview☆28Updated 3 years ago
- A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing☆70Updated 3 years ago
- Batch effects removal for microbiome data via conditional quantile regression☆27Updated 2 years ago
- Accurate metagenomi/metatranscriptomic analysis pipeline☆23Updated 3 years ago
- OPAL: Open-community Profiling Assessment tooL☆28Updated 3 months ago
- ☆41Updated 4 years ago