xmliu01 / Uncovering-the-TRN-involved-in-boosting-wheat-regeneration-and-transformationView external linksLinks
Code used in article "Uncovering the transcriptional regulatory network involved in boosting wheat regeneration and transformation".
☆12Mar 21, 2023Updated 2 years ago
Alternatives and similar repositories for Uncovering-the-TRN-involved-in-boosting-wheat-regeneration-and-transformation
Users that are interested in Uncovering-the-TRN-involved-in-boosting-wheat-regeneration-and-transformation are comparing it to the libraries listed below
Sorting:
- ☆12Nov 29, 2022Updated 3 years ago
- ☆12Updated this week
- Compare different genome alignment tools using a wide range of genomes with different complexities.☆14Dec 3, 2022Updated 3 years ago
- conserved non-coding sequence☆16Feb 21, 2022Updated 3 years ago
- ☆16May 30, 2022Updated 3 years ago
- Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum☆17Dec 19, 2023Updated 2 years ago
- ☆19Aug 29, 2025Updated 5 months ago
- bioinformatics learning☆13Oct 10, 2023Updated 2 years ago
- The ChIP-Seq peak calling algorithm using convolution neural networks☆15Jan 18, 2021Updated 5 years ago
- Transcriptional regulatory network inference from gene expression and prior information with LASSO-StARS☆15May 3, 2022Updated 3 years ago
- Python library for identification and masking of low-complexity regions in nucleotide sequences☆10Jan 23, 2026Updated 3 weeks ago
- All-in-one analysis pipeline☆37Sep 3, 2024Updated last year
- An interpretable machine learning algorithm to predict disordered protein phase separation based on biophysical interactions☆13Aug 2, 2022Updated 3 years ago
- RIESLING: Super-enhancer identification. (Rapid Identification of EnhancerS LInked to Nearby Genes)☆10Jun 28, 2018Updated 7 years ago
- scripts used for processing and analyzing data in the article.☆13Oct 31, 2019Updated 6 years ago
- TF-DNA-binding assay analysis pipeline☆12Aug 25, 2020Updated 5 years ago
- Code for TAD_SV project☆11Mar 16, 2022Updated 3 years ago
- Some NGS workflow created by snakemake☆14Jan 15, 2025Updated last year
- A haplotype-resolved and telomere-to-telomere genome assembly pipeline (PHap) tailored for autopolyploids, relying solely on common seque…☆16Jul 29, 2025Updated 6 months ago
- Interpretable bimodal network for transcription factors binding site prediction☆10Jun 29, 2023Updated 2 years ago
- ☆12Dec 15, 2020Updated 5 years ago
- ☆11May 4, 2021Updated 4 years ago
- ALLHiC: phasing and scaffolding polyploid genomes based on Hi-C data☆177Oct 20, 2024Updated last year
- A procedure to find Fst outliers based on an inferred distribution of neutral Fst☆19Aug 26, 2019Updated 6 years ago
- This is a basic repository with all the scripts necessary to reconstruct the data analysis from our work on the 200 Genomes☆12Aug 31, 2018Updated 7 years ago
- Base-pair resolution detection of transcription factor binding site by deep deconvolutional network☆10Sep 12, 2017Updated 8 years ago
- CLUMPS adapted to post-translational modifications.☆10May 22, 2025Updated 8 months ago
- ☆12Apr 14, 2021Updated 4 years ago
- Code and analysis for the 1000 tools paper☆11Nov 12, 2021Updated 4 years ago
- 提取 PDF 文件中的文本，使用 OpenAI 进行翻译，并将翻译结果写入 txt 文件中。☆12Jun 10, 2023Updated 2 years ago
- 𝛂Charges: A tool for the quick calculation of partial atomic charges for protein structures from AlphaFold DB☆12Dec 16, 2025Updated 2 months ago
- Homepage for YuLab-SMU☆14Feb 2, 2026Updated 2 weeks ago
- ☆15Sep 14, 2021Updated 4 years ago
- Seminar talk on a paper about phase separation due to membrane adhesion☆14Jan 11, 2021Updated 5 years ago
- Pipeline for the analysis of PE ChIP-seq data☆15Jul 20, 2020Updated 5 years ago
- Genome-wide association studies tutorial 🧬☆53Dec 2, 2019Updated 6 years ago
- Articles & happiness I want to share.☆13Jan 26, 2026Updated 3 weeks ago
- ☆12Jul 19, 2019Updated 6 years ago
- A Foundation Language Model For Multilayer Regulation of RNA☆18Nov 30, 2025Updated 2 months ago