TR annotation tool VAMPIRE
☆19Sep 2, 2026Updated 2 months ago
Alternatives and similar repositories for VAMPIRE
Users that are interested in VAMPIRE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- genotype and visualize structural variants in the human pangenome graphs☆16Nov 21, 2025Updated 11 months ago
- Genome Assembly Validation via Inter-SUNK distances in ONT reads☆16Feb 20, 2023Updated 3 years ago
- Workflow to visualize pggb graphs in jbrowse☆11Mar 15, 2024Updated 2 years ago
- repository for materials to do with the VGP phase 1 data freeze, analyses, and publication☆11Dec 23, 2025Updated 10 months ago
- ☆10Nov 20, 2025Updated 11 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A multiscale pangenome browser☆36Jul 18, 2026Updated 3 months ago
- ANI based satellite annotation☆31Aug 6, 2026Updated 2 months ago
- A GUI tools for Gap closed based on assembly graph☆14Nov 4, 2025Updated 11 months ago
- A tool for visualization of pairwise alignments of multiple sequences☆19Aug 12, 2025Updated last year
- Phasing reads with secondary alignments☆22Nov 30, 2024Updated last year
- A pipeline for genomic variant detection with genome assemblies at population scale☆43Oct 20, 2026Updated last week
- Post-verkko graph and assembly curation in Python.☆37Oct 24, 2026Updated last week
- A context-based long-read simulator☆15Oct 12, 2026Updated 3 weeks ago
- a precise pangenome browser combining linear and graph-based pan-genome☆13Jul 16, 2024Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Structural Variants ANnotator (SVAN)☆17Oct 16, 2026Updated 2 weeks ago
- Convergence analysis using relative rate and correcting for phylogenetic relatedness☆12Apr 25, 2025Updated last year
- ☆14Sep 21, 2026Updated last month
- ☆21Jul 12, 2026Updated 3 months ago
- A program for assessing the T2T genome continuity and completeness☆98Oct 13, 2026Updated 2 weeks ago
- Genome Assembly 102☆19Apr 23, 2025Updated last year
- rust tool to choose the best read alignment between haploids to a diploid reference genome☆21Oct 20, 2026Updated last week
- Pangenome structural variation (SV) merging and deduplication☆11Oct 10, 2026Updated 3 weeks ago
- PG-SCUnK mesure quality of Pan-Genome Graphs using Single Copy and Universal k-mers☆25Feb 16, 2026Updated 8 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- lace up GFA files using panSN path name sub-ranges to coordinate the lacing☆14Jul 30, 2025Updated last year
- Telomere local assembly, Improved whole genome polish, and Plastid assembly☆22Apr 25, 2025Updated last year
- ☆27Updated this week
- ☆21Dec 13, 2024Updated last year
- A newly designed version of Bamsnap with Long Read Support (LRS) which inspired by bamsnap (https://github.com/parklab/bamsnap)☆14Oct 13, 2026Updated 2 weeks ago
- Classify chimeric reads based on unique kmer contents☆14Aug 30, 2026Updated 2 months ago
- ☆10Oct 16, 2026Updated 2 weeks ago
- A integrated pipeline for estimating Convergent accelerated evolutionary conserved non-coding elements☆21Updated this week
- Graph Variant Benchmarking for the HPRC2☆11May 26, 2026Updated 5 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆26Oct 22, 2026Updated last week
- Misassembly Identifier☆29Updated this week
- The complete sequence of a Chinese individual☆14Oct 8, 2024Updated 2 years ago
- ☆29May 12, 2026Updated 5 months ago
- ☆45Dec 11, 2025Updated 10 months ago
- Fully automatic k-mer based polishing for genome assemblies. Based on original concept and design from Ivan Sovic, Ann McCartney, and Ara…☆11Mar 16, 2026Updated 7 months ago
- trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…☆109Oct 26, 2026Updated last week