Alternatives and similar repositories for SRY:

Users that are interested in SRY are comparing it to the libraries listed below

• baozg / phased-assembly-check
  ☆29Updated 2 months ago
• JanaSperschneider / FindTelomeres
  A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files
  ☆33Updated 2 years ago
• CAFS-bioinformatics / LR_Gapcloser
  use long sequenced reads to close gaps in assemblies
  ☆37Updated 6 years ago
• KolmogorovLab / hapdiff
  SV calling for diploid assemblies
  ☆26Updated 11 months ago
• mrvollger / NucFreq
  ☆35Updated last year
• zy-optimistic / GAEP
  A genome assembly assessment pipeline.
  ☆37Updated last year
• rlorigro / GFAse
  Tool for globally phasing diploid assembly graphs with orthogonal data
  ☆39Updated 3 months ago
• ablab / TandemTools
  Tool for assessing/improving assembly quality in extra-long tandem repeats
  ☆46Updated 4 years ago
• ablab / VerityMap
  ☆34Updated 2 years ago
• vgteam / giraffe-sv-paper
  ☆42Updated 10 months ago
• shingocat / lrscaf
  TGS scaffolding
  ☆46Updated 3 years ago
• piosierra / pantera
  Identification of transposable element families from pangenome polymorphisms
  ☆44Updated last week
• ChongLab / Inspector
  A tool for evaluate long-read de novo assembly results
  ☆43Updated 6 months ago
• Adamtaranto / teloclip
  A tool for the recovery of unassembled telomeres from soft-clipped read alignments.
  ☆35Updated 2 months ago
• 0xTCG / biser
  A fast tool for detecting and decomposing segmental duplications in genome assemblies
  ☆47Updated last year
• tangerzhang / calc_switchErr
  ☆27Updated 3 years ago
• JiaoLab2021 / EVG
  A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads
  ☆37Updated 8 months ago
• micahvista / VACmap
  VACmap: a long-read aligner specifically designed for complex structural variation discovery
  ☆34Updated 3 months ago
• dfguan / asset
  assembly evaluation tool
  ☆34Updated 2 years ago
• xjtu-omics / HiCAT
  HiCAT new project
  ☆27Updated last year
• schmeing / gapless
  Gapless provides combined scaffolding, gap-closing and assembly correction with long reads
  ☆35Updated 2 years ago
• shilpagarg / DipAsm
  ☆76Updated 4 years ago
• JiaoLab2021 / varigraph
  An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes
  ☆21Updated 2 weeks ago
• PacificBiosciences / jasmine
  Predict 5mC in PacBio HiFi reads
  ☆1Updated last month
• zeeev / smartie-sv
  calling SVs from Blasr contig level alignments
  ☆54Updated 7 years ago
• EichlerLab / svpop
  Variant annotation and merging pipeline
  ☆32Updated 2 months ago
• baozg / assembly-annotation-pipeline
  Plant genome assembly and annotation pipeline using snakemake
  ☆42Updated last year
• Jianwei-Zhang / DEGAP
  Dynamic Elongation of a Genome Assembly Path
  ☆21Updated 10 months ago
• BGI-Qingdao / stlfr2supernova_pipeline
  A pipeline to de novo assemble the stLFR reads using Supernova Assembler
  ☆20Updated 2 years ago
• schneebergerlab / AMPRIL-genomes
  scripts for the project of seven thaliana genomes assembly
  ☆38Updated 3 years ago