manifold metric and correction techniques for (Bayesian) GPLVM from GPy
☆12Mar 1, 2020Updated 6 years ago
Alternatives and similar repositories for topslam
Users that are interested in topslam are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Calculate indel trajectory likelihoods using methods of Miklós, Lunter & Holmes (2004), De Maio (2020), and Holmes (2020)☆14Sep 17, 2022Updated 3 years ago
- ☆11Feb 11, 2021Updated 5 years ago
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Oct 5, 2017Updated 8 years ago
- Rust crate with bindings and interface to the SPOA library for generating consensus sequences.☆13Apr 16, 2019Updated 7 years ago
- ☆17Jan 6, 2023Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A software package for analyzing snapshots of developmental processes☆162Sep 15, 2022Updated 3 years ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Nov 22, 2017Updated 8 years ago
- YARN: Robust Multi-Tissue RNA-Seq Preprocessing and Normalization☆13Mar 4, 2024Updated 2 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆18Mar 5, 2019Updated 7 years ago
- python convenience functions for working with Stan models (via pystan)☆13Jan 3, 2018Updated 8 years ago
- bgzip support for Rust☆18Nov 16, 2023Updated 2 years ago
- This is the code release for paper Continuous State HMMs for Modeling Time Series Single Cell RNA-Seq Data☆23Jan 22, 2018Updated 8 years ago
- R package for bcbio single-cell RNA-seq analysis.☆31Sep 9, 2024Updated last year
- Bumpers for Choc keycaps☆12Aug 17, 2024Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- An interface for Nested Stochastic Block Model for single cell analysis☆37May 13, 2026Updated 2 weeks ago
- A Weighted Exact Test for Mutually Exclusive Mutations in Cancer☆21Sep 30, 2018Updated 7 years ago
- AppleScript to quickly set the start and/or start dates of selected OmniFocus items using natural language syntax.☆13Apr 2, 2013Updated 13 years ago
- ☆12Sep 22, 2025Updated 8 months ago
- Machine learning use cases for teaching☆13Jul 12, 2017Updated 8 years ago
- R package for transfer learning of single-cell RNA-seq denoising☆31Jun 14, 2022Updated 3 years ago
- Consistent Clusters for scRNA-seq☆11Oct 6, 2021Updated 4 years ago
- Shadow objects for AnnData and MuData (experimental)☆11Feb 28, 2025Updated last year
- 使用 rails + mongodb 搭建论坛☆10Oct 25, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Creates Random Coding Sequences with specified GC content and Amino Acid usage☆10Jun 21, 2022Updated 3 years ago
- Clone identification from single-cell data☆65Nov 10, 2022Updated 3 years ago
- COMUNET: a tool to explore and visualize intercellular communication☆12Apr 15, 2020Updated 6 years ago
- a lexicographically-based GTF/GFF sorter☆39Mar 16, 2026Updated 2 months ago
- A scientific publication, describing a way to improve microscopy. This repository hosts everything you need to reproduce our results. Rea…☆13Jun 22, 2024Updated last year
- Deep convolutional neural networks for biological motion analysis☆14Jan 26, 2019Updated 7 years ago
- An actionable database of publicly available single-cell RNA-seq data☆41Apr 13, 2019Updated 7 years ago
- bash command line completion for pandoc☆30Nov 9, 2015Updated 10 years ago
- Guided construction of single cell reference☆15Jul 3, 2023Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Map Reduce Implementation of a community detection algorithm extending Louvain method for community detection.☆15Jan 13, 2016Updated 10 years ago
- Variational Auto Encoders for learning binding signatures of transcription factors☆14Mar 14, 2024Updated 2 years ago
- Image Processing Package for the Paper "Self-organization and symmetry breaking in intestinal organoid development"☆11Oct 27, 2020Updated 5 years ago
- ☆10Jan 20, 2023Updated 3 years ago
- ENHANCE: Accurate denoising of single-cell RNA-Seq data (Python implementation)☆14Jun 5, 2019Updated 6 years ago
- A pelican theme that attempts to use the [Tufte CSS](http://www.daveliepmann.com/tufte-css/) provide by Dave Liepmann. I hope I do him ju…☆16Sep 13, 2021Updated 4 years ago
- Wishbone is an algorithm to align cells along developmental trajectories with branches☆42Feb 8, 2020Updated 6 years ago