aristoteleo / dynamo-tutorials
Tutorials on using latest dynamo package
☆24Updated 3 months ago
Alternatives and similar repositories for dynamo-tutorials:
Users that are interested in dynamo-tutorials are comparing it to the libraries listed below
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆60Updated 9 months ago
- ACTIONet single-cell analysis framework☆37Updated 4 months ago
- Regulatory networks with Direct Information in python☆39Updated last year
- ☆45Updated 2 years ago
- ☆24Updated 4 months ago
- ☆25Updated 3 years ago
- ☆10Updated last year
- ☆26Updated last year
- Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics☆29Updated 2 weeks ago
- Dynamical systems methods for RNA velocity analysis☆24Updated 3 years ago
- ☆39Updated this week
- Unsupervised cell functional annotation for single-cell RNA-Seq☆22Updated 2 years ago
- Imputation method for scRNA-seq based on low-rank approximation☆75Updated last year
- PRObabilistic Simulations of ScRNA-seq Tree-like Topologies☆26Updated last year
- Cell cycle inference in single-cell RNA-seq☆41Updated last year
- Bayesian model for RNA velocity estimation of periodic manifolds☆32Updated 7 months ago
- pipeline for demultiplex and align both ATAC and RNA data generated in SHARE-seq☆16Updated 2 years ago
- Task-based gene regulatory network inference using single-cell or bulk gene expression data conditioned on a prior network.☆47Updated 6 months ago
- Additional code and analysis from the single-cell integration benchmarking project☆56Updated 2 years ago
- MARIO: single-cell proteomic data matching and integration using both shared and distinct features☆22Updated last year
- spatial transcriptome, single cell☆67Updated last year
- Spatial reconstruction of dissociated single-cell data☆17Updated last year
- Quasilinear data representations for single-cell omics data analysis☆42Updated last year
- Single Cell Transcriptomics of 25 Human Organs to Create a Tabula Sapiens☆40Updated last year
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆36Updated 2 weeks ago
- MultiMAP for integration of single cell multi-omics☆54Updated last year
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆37Updated 4 months ago
- Code used to analyze single cell RNA and ATAC sequencing in developing human brain☆31Updated 3 years ago
- scOpen: single-cell open chromatin analysis via NMF modelling☆25Updated last year
- ☆44Updated 8 months ago