Cytometry by time-of-flight(CyTOF) data is very useful in studying the presence/absence of antigens/surface markers at single cell level. There are multiple tools to analyze CyTOF data but here I am presenting a tutorial of how one can quickly use Seurat (R package for scRNA-Seq analysis) for analyzing CyTOF data and understand the cellular and …
☆15Jun 1, 2020Updated 5 years ago
Alternatives and similar repositories for Analyze_CyTOF_Using_Seurat
Users that are interested in Analyze_CyTOF_Using_Seurat are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆25May 7, 2022Updated 3 years ago
- Hierarchical classification of cells☆28Aug 2, 2024Updated last year
- ☆16Apr 17, 2024Updated 2 years ago
- scRNA-seq clustering, visualization, and differential expression pipeline from Sims Lab papers☆22Sep 28, 2021Updated 4 years ago
- Human brain, >200,000 nuclei☆25Jun 17, 2021Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Flow cytometry analysis workflow. The aim of this project is to provide an intuitive workflow for the analysis of high-dimensionality cyt…☆28Updated this week
- ☆33Jan 22, 2026Updated 3 months ago
- Repository for signature genes from Immune Cell Atlas☆20Sep 25, 2019Updated 6 years ago
- SuperCell for Cytometry data☆13Oct 14, 2025Updated 6 months ago
- post-clustering differential expression test☆37May 28, 2019Updated 6 years ago
- ProTiler method for the analysis and visualization of CRISPR screens with tiling-sgRNA design☆14Feb 28, 2023Updated 3 years ago
- CiteFuse:☆28Feb 7, 2023Updated 3 years ago
- ☆21Jul 17, 2024Updated last year
- Turkey Map with R☆10Nov 24, 2017Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Robust single cell clustering and comparison of population compositions across tissues and experimental models via similarity analysis.☆15Jul 16, 2023Updated 2 years ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆21Jan 4, 2023Updated 3 years ago
- Moana: Robust cell type classification of single-cell RNA-Seq data☆24Nov 8, 2018Updated 7 years ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆17Jun 28, 2025Updated 10 months ago
- Semantic Segmentor for Protein Structures.☆11Dec 20, 2021Updated 4 years ago
- flowWorkspace☆48Feb 19, 2026Updated 2 months ago
- Cytofin-an R package for CyTOF data integration☆12Jan 13, 2022Updated 4 years ago
- Tool for analyzing clusters of genes using LLM providers.☆27Apr 22, 2026Updated last week
- Digital Cell Sorter (DCS): single cell RNA-seq analysis toolkit. Documentation:☆24Jun 8, 2021Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- An R package for analyzing high-dimensional cytometry data using the tidyverse.☆20Aug 25, 2024Updated last year
- cTPnet Package☆27Jul 12, 2022Updated 3 years ago
- MorphVAE: Generating Neural Morphologies from 3D-Walks☆13Sep 4, 2022Updated 3 years ago
- Mixture-of-Experts Variational Autoencoder for Clustering and Generating from Similarity-Based Representations on Single Cell Data☆13Apr 22, 2021Updated 5 years ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Nov 22, 2017Updated 8 years ago
- Marker gene profile estimation method used in NeuroExpresso manuscript☆14Jul 11, 2019Updated 6 years ago
- Terraform template to create AWS resources to execute jobs using nextflow☆22Mar 1, 2023Updated 3 years ago
- scDataviz: single cell dataviz and downstream analyses☆66Sep 24, 2021Updated 4 years ago
- ☆12May 28, 2018Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆18Apr 5, 2024Updated 2 years ago
- Highly scalable integration and classification of single-cell RNA sequencing data☆11Dec 27, 2020Updated 5 years ago
- scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks☆10Aug 4, 2020Updated 5 years ago
- ☆10Sep 11, 2020Updated 5 years ago
- Code for the 2020 class Networks in Computational Biology (CS446/546) at Oregon State University☆15Oct 29, 2020Updated 5 years ago
- Representation of Module Activity☆10May 31, 2017Updated 8 years ago
- Evaluation of Cell Type Annotation R Packages on Single Cell RNA-seq Data☆31Feb 20, 2024Updated 2 years ago