meltonlab / scbeta_indropsLinks
Analysis of single cell RNA-Seq data from Veres et al.
☆12Updated 5 years ago
Alternatives and similar repositories for scbeta_indrops
Users that are interested in scbeta_indrops are comparing it to the libraries listed below
Sorting:
- ☆34Updated 5 years ago
- Harvard FAS informatics scRNAseq workshop website☆37Updated 5 years ago
- Codes associated with the Poran, Nötzel et al. paper titled "Single-cell RNA-seq reveals a signature of sexual commitment in malaria para…☆10Updated 7 years ago
- Filtering of PDX samples for mouse derived reads☆28Updated 2 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- ☆38Updated 2 years ago
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆51Updated last year
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆49Updated 4 years ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 6 years ago
- An R package to analyze single-cell V(D)J data☆28Updated last year
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆76Updated 3 months ago
- Reference transcriptome indices build from kallisto for popular organisms☆42Updated last year
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆45Updated last year
- processes GoT amplicon data and generates a table of metrics☆29Updated 2 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- ☆17Updated 6 years ago
- Bioconductor package esATAC: an Easy-to-use Systematic pipeline for ATAC-seq data analysis☆23Updated 2 years ago
- Repo for Physalia course Analysis of Single Cell RNA-Seq data☆32Updated 5 years ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- Processing scripts for single cell DNA sequencing on the Tapestri platform☆24Updated 2 years ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆43Updated 4 years ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆54Updated 4 years ago
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 4 years ago
- scRNA-seq cell type identification☆43Updated 5 years ago
- ATAC-seq Quality Control☆23Updated last month
- CLIP-seq Analysis of Multi-mapped reads☆30Updated 3 years ago
- ☆55Updated 4 years ago
- documentation for trackViewer☆29Updated 5 years ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆36Updated 6 years ago