perslab / timshel-2020Links
Code to reproduce analysis and figures for 'Genetic mapping of etiologic brain cell types for obesity' (Timshel, eLife 2020)
☆14Updated 4 years ago
Alternatives and similar repositories for timshel-2020
Users that are interested in timshel-2020 are comparing it to the libraries listed below
Sorting:
- A GWAS fine-mapping pipeline used in CAUSALdb☆26Updated 3 years ago
- ☆11Updated 2 years ago
- Tissue of ACTion scores for Investigating Complex trait-Associated Loci☆13Updated 4 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 3 years ago
- Estimate genetic correlation using predicted expression☆22Updated 7 years ago
- Primo☆16Updated 3 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆33Updated 4 years ago
- cEll tyPe enrIChment☆15Updated 2 years ago
- Multi-Omic Strategies for TWAS☆13Updated 2 years ago
- Older repo for MRLocus. See new website for software usage guide:☆15Updated last year
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 5 years ago
- Fine-mapping method only using summary statistics☆19Updated 9 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Updated 2 years ago
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆23Updated 5 years ago
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Updated 6 years ago
- ☆15Updated last year
- Pan cancer summary statistics from meta analyses of UK Biobank and Kaiser GERA cohorts.☆16Updated 5 years ago
- metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…☆20Updated 4 years ago
- Colocalisation pipeline for Open Targets Genetics☆17Updated 3 years ago
- Data and code for the Effector index☆14Updated 4 years ago
- ☆18Updated 3 years ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆27Updated 2 years ago
- GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline☆18Updated 4 years ago
- RSS-NET: Regression with Summary Statistics exploiting Network Topology☆19Updated 2 months ago
- R package for "Multi-tissue Transcriptome-Wide Association Studies (MTWAS)"☆15Updated last year
- Specification for the GWAS-VCF format (manuscript in preparation)☆24Updated 3 years ago
- Implementation of LTFH++☆11Updated last month
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆13Updated 2 years ago
- Scripts used for generating Neale Lab UKB results☆20Updated 2 years ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆52Updated 2 years ago