10XGenomics / encloneLinks
VDJ Clonotyping & Analysis Tools
☆49Updated 6 months ago
Alternatives and similar repositories for enclone
Users that are interested in enclone are comparing it to the libraries listed below
Sorting:
- Builds a PEP from SRA or GEO accessions☆53Updated 2 months ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆38Updated 6 years ago
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆29Updated 4 years ago
- Snakemake pipeline for running MAJIQ☆23Updated last year
- Feature-rich Python implementation of the tximport package for gene count estimation.☆37Updated last month
- Please consider using/contributing to https://github.com/nf-core/scdownstream☆25Updated last year
- binned motif enrichment analysis and visualisation☆41Updated this week
- Create QC and summary reports for Alevin output☆31Updated last month
- Inferring gene co-expression networks from single cell gene expression data☆28Updated 3 years ago
- simplified cellranger for long-read data☆19Updated 2 weeks ago
- Millefy: Genome browser-like visualization of single-cell RNA-seq dataset☆29Updated 5 years ago
- ☆44Updated 10 months ago
- A rust framework to make using alevin-fry even simpler☆56Updated 4 months ago
- University of Cambridge PhD thesis☆15Updated 4 years ago
- Explore and download data from the recount3 project☆36Updated 4 months ago
- ☆37Updated 2 weeks ago
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆31Updated 7 years ago
- Explore the cancer relevance of your gene list☆52Updated 6 months ago
- An R package to analyze single-cell V(D)J data☆28Updated last year
- ☆20Updated 3 years ago
- ChIP-Atlas: Browse and analyze all public ChIP/DNase-seq data on your browser☆78Updated this week
- ☆24Updated last year
- Visual exploratory analysis of gene expression data☆43Updated last week
- BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq data☆42Updated last year
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆34Updated 3 years ago
- ☆15Updated 3 years ago
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆20Updated 5 months ago
- A single cell sequencing read simulator.☆33Updated 11 months ago
- Quickomics: exploring omics data in an intuitive, interactive and informative manner. Bioinformatics. 2021 Apr 26:btab255.☆41Updated last week
- scover☆23Updated last year