SydneyBioX / CiteFuse
CiteFuse:
☆28Updated 2 years ago
Alternatives and similar repositories for CiteFuse:
Users that are interested in CiteFuse are comparing it to the libraries listed below
- benchmark for single-cell RNA-seq imputation methods☆25Updated last year
- Mosaic single cell data integration using non-overlapping features☆37Updated 2 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- R package for transfer learning of single-cell RNA-seq denoising☆30Updated 2 years ago
- scID☆13Updated 3 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆21Updated last year
- Spatially-resolved Transcriptomics via Epitope Anchoring☆18Updated last year
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆34Updated 4 years ago
- Marker gene selection from scRNA-seq data☆15Updated 4 years ago
- ☆41Updated 4 years ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- RNA velocity validation☆22Updated 3 years ago
- ☆29Updated 2 years ago
- SOMatic is a tool for building Self-Organizing Maps and linking multiple maps.☆14Updated 7 months ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆41Updated last year
- Landscape Single Cell Entropy☆19Updated 4 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆37Updated 3 years ago
- ☆22Updated 5 months ago
- A single cell sequencing read simulator.☆27Updated 6 months ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- Information-based dimensionality reduction☆29Updated 4 months ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 2 years ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆36Updated last month
- Heterogeneity Induced Pre-Processing tOol☆18Updated 3 years ago
- NicheDE is a method that detects context dependent changes in gene expression in spatial transcriptomic data.☆17Updated 6 months ago
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆15Updated 2 years ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆15Updated 2 years ago
- Predicted cell-cell interactions of the aging mouse brain☆20Updated 5 years ago
- Automated marker-based annotation of cell types☆13Updated 2 years ago