Alternatives and similar repositories for rust-bio-types:

Users that are interested in rust-bio-types are comparing it to the libraries listed below

• markschl / seq_io
  FASTA and FASTQ parsing in Rust
  ☆74Updated 3 weeks ago
• zaeleus / squab
  Alignment-based gene expression quantification
  ☆27Updated this week
• informationsea / vcf-rs
  Rust implmentation of VCF parser
  ☆22Updated 2 years ago
• COMBINE-lab / kmers
  A bit-packed k-mer representation (and relevant utilities) for rust
  ☆48Updated 7 months ago
• TianyiShi2001 / bioinformatics-algorithms-rs
  Bioinformatics Algorithms implemented in Rust for Learners
  ☆30Updated 3 years ago
• 10XGenomics / rust-toolbox
  Rust utility code
  ☆32Updated last year
• aseyboldt / fastq-rs
  ☆51Updated 2 years ago
• noamteyssier / ggetrs
  Efficient querying of biological databases
  ☆34Updated 3 weeks ago
• lskatz / fasten
  Fasten toolkit, for streaming operations on fastq files
  ☆77Updated last month
• ocxtal / udon
  BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing
  ☆20Updated last year
• 10XGenomics / rust-debruijn
  De Bruijn graphs in Rust
  ☆66Updated 6 months ago
• angelovangel / faster
  A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust
  ☆30Updated last month
• umccr / htsget-rs
  A server implementation of the htsget protocol for bioinformatics in Rust
  ☆41Updated this week
• 10XGenomics / rust-pseudoaligner
  Single-Cell RNA-seq pseudo-aligner
  ☆51Updated 9 months ago
• jeff-k / bio-seq
  Bit-packed and well-typed biological sequences
  ☆30Updated this week
• markschl / seqtool
  Fast and flexible tool for reading, modifying and writing biological sequences
  ☆17Updated last month
• ostnam / rust-wfa
  ☆11Updated 2 years ago
• COMBINE-lab / terminus
  ☆57Updated 2 years ago
• mrvollger / rustybam
  bioinformatics toolkit in rust
  ☆86Updated 9 months ago
• arewebioyet / arewebioyet.github.io
  Rust in bioinformatics and computational biology
  ☆20Updated 2 years ago
• informationsea / bgzip-rs
  bgzip support for Rust
  ☆16Updated last year
• 38 / grass
  ☆21Updated 2 years ago
• jguhlin / minimap2-rs
  Rust bindings to minimap2 library
  ☆87Updated last month
• rchikhi / rust-alignbench
  Pairwise nucleotide alignment benchmark of Rust bindings
  ☆31Updated last year
• jguhlin / sfasta
  sfasta
  ☆35Updated last month
• rust-bio / rust-bio-tools
  A set of command line utilities based on Rust-Bio.
  ☆191Updated 7 months ago
• noamteyssier / gia
  gia: Genomic Interval Arithmetic
  ☆61Updated 6 months ago
• rust-bio / hts-sys
  Raw rust bindings for htslib
  ☆10Updated 2 months ago
• stjude-rust-labs / sprocket
  A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
  ☆42Updated this week
• luizirber / nthash
  ntHash implementation in Rust
  ☆35Updated 7 months ago