A library of common biomedical types.
☆40Apr 14, 2025Updated last year
Alternatives and similar repositories for rust-bio-types
Users that are interested in rust-bio-types are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A set of command line utilities based on Rust-Bio.☆205Jun 24, 2024Updated 2 years ago
- This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.☆367Updated this week
- This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementat…☆1,818Jul 6, 2026Updated 2 weeks ago
- De Bruijn graphs in Rust☆70Jul 22, 2024Updated 2 years ago
- VDJ Clonotyping & Analysis Tools☆50Mar 7, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Rust utility code☆32Feb 9, 2024Updated 2 years ago
- Pipeline for automatic processing and quality control of mass spectrometry data☆14Jan 30, 2025Updated last year
- A rust framework to make using alevin-fry even simpler☆66Jul 10, 2026Updated last week
- Fast FASTX parsing and k-mer methods in Rust☆213Jun 22, 2026Updated last month
- Single-cache-miss rank queries over size 2 and 4 alphabets. 2x faster than all other Rust crates.☆15Apr 1, 2026Updated 3 months ago
- FASTA and FASTQ parsing in Rust☆86Mar 14, 2025Updated last year
- Analysis code for knowledge discovery project☆12Sep 25, 2018Updated 7 years ago
- Docker image build for nextstrain/base☆12Jun 24, 2026Updated 3 weeks ago
- Tools for working FASTQ files from sequencers (R1/R2/I1/I2)☆12Dec 6, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Bioinformatics Algorithms implemented in Rust for Learners☆31Aug 1, 2021Updated 4 years ago
- Exercises for training scientists to perform some RNA-seq analyses.☆11Oct 7, 2019Updated 6 years ago
- A Python wrapper for the bioRxiv API.☆11Aug 18, 2021Updated 4 years ago
- 2bit file format implementation in Rust☆16Mar 27, 2026Updated 3 months ago
- Rust implmentation of VCF parser☆27Oct 2, 2022Updated 3 years ago
- ☆52Sep 20, 2022Updated 3 years ago
- ☆15Apr 2, 2025Updated last year
- ☆16Mar 19, 2026Updated 4 months ago
- Simple and transparent support for compressed files.☆81Jul 1, 2026Updated 3 weeks ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Radix sort implementation for sorting by scalar keys (integers, floats, chars, bools)☆25Aug 19, 2024Updated last year
- Utilities for building and managing bioconda recipes☆108Jul 13, 2026Updated last week
- A Rust library providing fully dynamic sets of k-mers with high locality☆47May 13, 2026Updated 2 months ago
- Python wrapper around the popular ChIP-Seq peak caller SICER☆15Dec 7, 2017Updated 8 years ago
- Build and deploy cross platform bioinformatic utilities with Rust.☆19Apr 1, 2025Updated last year
- AWS lambda S3 + rust-htslib: A serverless bioinformatics example☆14Jun 7, 2022Updated 4 years ago
- Utility functions for web applications☆23Updated this week
- Library of snakemake rules.☆13Oct 2, 2018Updated 7 years ago
- A command-line DSL budget manager☆13Oct 25, 2022Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Blog on postdoc @ KIT Karlsruhe☆40Jul 12, 2026Updated last week
- FM-index for Rust☆25Jun 29, 2026Updated 3 weeks ago
- ☆13Jul 13, 2026Updated last week
- ✏️ Genome assembly polishing & SNV detection☆73Jun 12, 2026Updated last month
- a wee tool for random access into BGZF files.☆86May 10, 2018Updated 8 years ago
- 🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transc…☆213Jul 10, 2026Updated last week
- Enriched Domain Detector for ChIP-seq data☆16Aug 17, 2022Updated 3 years ago