rust-bio / rust-bio-typesLinks
A library of common biomedical types.
☆37Updated 3 months ago
Alternatives and similar repositories for rust-bio-types
Users that are interested in rust-bio-types are comparing it to the libraries listed below
Sorting:
- Efficient querying of biological databases☆39Updated 3 weeks ago
- Rust implmentation of VCF parser☆23Updated 2 years ago
- FASTA and FASTQ parsing in Rust☆79Updated 4 months ago
- Single-Cell RNA-seq pseudo-aligner☆51Updated last year
- bgzip support for Rust☆16Updated last year
- A server implementation of the htsget protocol for bioinformatics in Rust☆45Updated 2 months ago
- ☆51Updated 2 years ago
- De Bruijn graphs in Rust☆71Updated 11 months ago
- Alignment-based gene expression quantification☆29Updated 3 months ago
- Bioinformatics Algorithms implemented in Rust for Learners☆32Updated 3 years ago
- A set of command line utilities based on Rust-Bio.☆197Updated last year
- A lightweight platform-accelerated library for biological motif scanning using position weight matrices.☆51Updated last month
- A Rust library for parsing, writing and manipulating Genbank sequence files☆20Updated 2 months ago
- Rust crates for working with Workflow Description Language (WDL) documents.☆55Updated this week
- BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing☆20Updated last year
- A bit-packed k-mer representation (and relevant utilities) for rust☆48Updated last year
- A high efficiency binary format for sequencing data☆63Updated 2 weeks ago
- Rust wrapper for STAR aligner☆17Updated last week
- Rust bindings to minimap2 library☆101Updated 2 weeks ago
- Bit-packed and well-typed biological sequences☆34Updated 2 months ago
- Fasten toolkit, for streaming operations on fastq files☆79Updated 3 months ago
- Rust utility code☆33Updated last year
- Build and deploy cross platform bioinformatic utilities with Rust.☆19Updated 3 months ago
- ☆58Updated 2 years ago
- Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.☆127Updated 4 years ago
- A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust☆32Updated 6 months ago
- The D4 Quantitative Data Format☆166Updated 2 months ago
- bioinformatics toolkit in rust☆90Updated last month
- ☆11Updated 3 years ago
- provides common tools and lookup tables used primarily by the hgvs and uta packages☆22Updated 4 months ago