Alternatives and similar repositories for rust-bio-types

Users that are interested in rust-bio-types are comparing it to the libraries listed below

• noamteyssier / ggetrs
  Efficient querying of biological databases
  ☆40Updated this week
• 10XGenomics / rust-pseudoaligner
  Single-Cell RNA-seq pseudo-aligner
  ☆51Updated last year
• informationsea / vcf-rs
  Rust implmentation of VCF parser
  ☆24Updated 2 years ago
• markschl / seq_io
  FASTA and FASTQ parsing in Rust
  ☆79Updated 4 months ago
• aseyboldt / fastq-rs
  ☆51Updated 2 years ago
• zaeleus / squab
  Alignment-based gene expression quantification
  ☆29Updated 4 months ago
• 10XGenomics / rust-debruijn
  De Bruijn graphs in Rust
  ☆71Updated last year
• ArcInstitute / binseq
  A high efficiency binary format for sequencing data
  ☆68Updated last month
• ocxtal / udon
  BAM CIGAR / MD transcoder for compact on-memory representation and quick drawing
  ☆21Updated 2 years ago
• lskatz / fasten
  Fasten toolkit, for streaming operations on fastq files
  ☆79Updated 3 months ago
• umccr / htsget-rs
  A server implementation of the htsget protocol for bioinformatics in Rust
  ☆45Updated this week
• jeff-k / bio-seq
  Bit-packed and well-typed biological sequences
  ☆35Updated last week
• 10XGenomics / orbit
  Rust wrapper for STAR aligner
  ☆18Updated last week
• rust-bio / rust-bio-tools
  A set of command line utilities based on Rust-Bio.
  ☆198Updated last year
• dlesl / gb-io
  A Rust library for parsing, writing and manipulating Genbank sequence files
  ☆21Updated 3 months ago
• jguhlin / sfasta
  sfasta
  ☆35Updated 3 months ago
• 10XGenomics / rust-bwa
  Rust wrapper of the BWA C API
  ☆18Updated 2 months ago
• TianyiShi2001 / bioinformatics-algorithms-rs
  Bioinformatics Algorithms implemented in Rust for Learners
  ☆32Updated 4 years ago
• informationsea / bgzip-rs
  bgzip support for Rust
  ☆16Updated last year
• Ebedthan / sabreur
  fast, reliable and handy demultiplexing tool for fastx files
  ☆14Updated last week
• COMBINE-lab / kmers
  A bit-packed k-mer representation (and relevant utilities) for rust
  ☆48Updated last year
• 10XGenomics / rust-toolbox
  Rust utility code
  ☆33Updated last year
• zachcp / bioinformaticstoolkit
  Build and deploy cross platform bioinformatic utilities with Rust.
  ☆19Updated 4 months ago
• stjude-rust-labs / sprocket
  A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
  ☆83Updated this week
• natir / vcf2parquet
  Convert vcf in parquet
  ☆27Updated 6 months ago
• arewebioyet / arewebioyet.github.io
  Rust in bioinformatics and computational biology
  ☆20Updated 2 years ago
• fastqc-rs / fastqc-rs
  A quality control tool for FASTQ files written in rust
  ☆50Updated last month
• stjude-rust-labs / wdl
  Rust crates for working with Workflow Description Language (WDL) documents.
  ☆56Updated this week
• stjude-rust-labs / ngs
  Command line utility for working with next-generation sequencing files.
  ☆35Updated last month
• 10XGenomics / fastq_set
  Tools for working FASTQ files from sequencers (R1/R2/I1/I2)
  ☆13Updated 8 months ago