oxpig / SPACE2Links
Tool for rapid clustering of antibody models by the structure of their CDRs.
☆23Updated 6 months ago
Alternatives and similar repositories for SPACE2
Users that are interested in SPACE2 are comparing it to the libraries listed below
Sorting:
- ANTIPASTI (ANTIbody Predictor of Affinity from STructural Information) is a Deep Learning model that predicts the binding affinity of ant…☆37Updated last year
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆31Updated last year
- mBER - Manifold Binder Engineering and Refinement. mBER enables antibody binder design by leveraging structure templates and sequence con…☆95Updated 3 weeks ago
- ☆56Updated 5 months ago
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆115Updated 5 months ago
- ☆47Updated last year
- ☆21Updated 9 months ago
- PLM based active learning model for protein engineering☆84Updated last year
- AlphaFold-initiated replica exchange protein docking☆87Updated 7 months ago
- Convenience Python APIs for antibody numbering using ANARCI☆114Updated 8 months ago
- Tool for modelling the CDRs of antibodies☆50Updated 3 years ago
- Machine learning-driven antibody design☆63Updated 2 years ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- Predict the structure of immune receptor proteins☆170Updated 2 months ago
- ☆74Updated last year
- Learning the language of protein-protein interactions☆124Updated 2 weeks ago
- Tools for annotation, processing and ML for antibody sequences☆39Updated last week
- Fitness landscapes for antibodies☆138Updated last month
- Code for ColabDock paper☆151Updated 9 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆91Updated last year
- AlphaBind code + model accompanying pre-print☆89Updated 6 months ago
- Protein Structure Analysis☆63Updated 4 months ago
- ☆45Updated 10 months ago
- ☆29Updated 5 months ago
- ☆38Updated 2 years ago
- Efficient implementatin of ESM family.☆80Updated 4 months ago
- ☆122Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆78Updated 3 months ago
- Graph Network for protein-protein interface including language model features☆34Updated last year