PRIDE-Archive / ms-data-core-apiLinks
Open-source java library to handle different file format standards for proteomics. Specially ms-data-core-api is good for MetaData representation.
☆12Updated 6 years ago
Alternatives and similar repositories for ms-data-core-api
Users that are interested in ms-data-core-api are comparing it to the libraries listed below
Sorting:
- Top down / bottom up, MS/MS analysis tool for DDA and DIA mass spectrometry data☆31Updated 3 years ago
- Mass spectrometry data visualization☆38Updated 5 years ago
- Open source Java library for computational proteomics☆34Updated 3 weeks ago
- MS File ToolBox - tools for parsing some mass-spectrometry related file formats (mzML, mzXML, pep.xml, prot.xml, etc.)☆12Updated 3 years ago
- MSDK source code repository☆40Updated 3 years ago
- Some hopefully useful tools for mass spectrometry applied to proteomics☆53Updated 4 years ago
- Computational analysis for mass spectrometry-based proteomics data☆11Updated 9 years ago
- Computational analysis for mass spectrometry-based proteomics data☆20Updated 7 months ago
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆23Updated 5 months ago
- Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis☆44Updated this week
- An extension of the ProteoWizard framework enabling the support of the mzDB format☆13Updated 4 years ago
- mzTab Reporting MS-based Proteomics and Metabolomics Results☆43Updated 9 months ago
- A modest Feature Finder (moFF) to extract MS1 intensities from Thermo raw file☆33Updated 4 years ago
- HUPO-PSI mass spectrometry CV☆39Updated 3 weeks ago
- Repository for mzIdentML and the corresponding examples☆26Updated last year
- Instrument Application Programming Interface☆51Updated 3 months ago
- Library for mass spectrometry projects☆27Updated last month
- Repository for mzML and the corresponding examples☆33Updated last year
- Automatically exported from code.google.com/p/mstoolkit☆30Updated last month
- MZmine 2 source code repository☆135Updated last year
- PIA - Protein Inference Algorithms☆24Updated 3 weeks ago
- Interpretation of proteomics identification results☆53Updated last month
- ☆14Updated 3 years ago
- sirius-libs - Metabolomics mass spectrometry framework for molecular formula identification of small molecules written in Java☆55Updated last year
- Semi-supervised learning for peptide identification from shotgun proteomics datasets☆142Updated last month
- PRIDE Inspector is a Java desktop application to visualise and Quality Assessment on Mass Spectrometry data and Proteomics☆16Updated 3 years ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆82Updated 2 months ago
- Group-DIA, a software for analyzing multiple DIA data files☆13Updated 9 years ago
- ☆24Updated 2 years ago
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆122Updated last month