PRIDE-Archive / ms-data-core-apiLinks
Open-source java library to handle different file format standards for proteomics. Specially ms-data-core-api is good for MetaData representation.
☆12Updated 5 years ago
Alternatives and similar repositories for ms-data-core-api
Users that are interested in ms-data-core-api are comparing it to the libraries listed below
Sorting:
- Top down / bottom up, MS/MS analysis tool for DDA and DIA mass spectrometry data☆31Updated 2 years ago
- Mass spectrometry data visualization☆36Updated 4 years ago
- MS File ToolBox - tools for parsing some mass-spectrometry related file formats (mzML, mzXML, pep.xml, prot.xml, etc.)☆12Updated 3 years ago
- Open source Java library for computational proteomics☆34Updated 2 weeks ago
- Computational analysis for mass spectrometry-based proteomics data☆20Updated 3 months ago
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆21Updated last month
- Computational analysis for mass spectrometry-based proteomics data☆11Updated 9 years ago
- An extension of the ProteoWizard framework enabling the support of the mzDB format☆13Updated 4 years ago
- MSDK source code repository☆39Updated 2 years ago
- Some hopefully useful tools for mass spectrometry applied to proteomics☆53Updated 3 years ago
- Semi-supervised learning for peptide identification from shotgun proteomics datasets☆134Updated last month
- Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis☆42Updated 2 weeks ago
- Thermo MSFileReader Python bindings☆69Updated 4 years ago
- Library for mass spectrometry projects☆26Updated last week
- A modest Feature Finder (moFF) to extract MS1 intensities from Thermo raw file☆33Updated 4 years ago
- Instrument Application Programming Interface☆49Updated 6 months ago
- Repository for mzIdentML and the corresponding examples☆24Updated last year
- Group-DIA, a software for analyzing multiple DIA data files☆13Updated 8 years ago
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆53Updated this week
- This is a R package for alignment of DIA mass-spec data☆12Updated 4 years ago
- MZmine 2 source code repository☆133Updated last year
- Automatically exported from code.google.com/p/mstoolkit☆28Updated 5 months ago
- ☆27Updated 3 months ago
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆118Updated 3 weeks ago
- Some shell scripts related to Thermo Fisher raw format conversion using msconvert☆10Updated 9 months ago
- Workflow for LC-MS feature analysis and spatial mapping☆19Updated 7 years ago
- ☆15Updated 3 years ago
- ☆24Updated 2 years ago
- Interpretation of proteomics identification results☆50Updated 2 weeks ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆24Updated 3 months ago