carpentries-incubator / workflows-nextflowLinks
Workflow management with Nextflow and nf-core
☆25Updated 7 months ago
Alternatives and similar repositories for workflows-nextflow
Users that are interested in workflows-nextflow are comparing it to the libraries listed below
Sorting:
- visual analysis of your VCF files☆36Updated 2 years ago
- The Zavolab Automated RNA-seq Pipeline☆35Updated last month
- interactive plots for differential expression analysis☆34Updated 2 months ago
- Variant catalogue pipeline☆25Updated 4 months ago
- A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies☆35Updated last year
- Genomic data interpretation and visualization Workshop☆21Updated last month
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆48Updated 2 weeks ago
- rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis☆57Updated 3 months ago
- Examples showing how to configure Nextflow to run with Wave containers provisioning service☆21Updated 10 months ago
- Re-analysis of data provided by Gihawi et al. 2023 bioRxiv☆26Updated 2 years ago
- Bioinformatics analysis scripts, workflows, general code examples☆53Updated 4 years ago
- Master of Pores 2☆23Updated 9 months ago
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆20Updated 8 years ago
- ☆34Updated last week
- Useful tools for working with Salmon output☆38Updated 5 years ago
- Sphinx documentation source for a computational genomics tutorial.☆34Updated 4 years ago
- Please consider using/contributing to https://github.com/nf-core/sarek☆41Updated 4 years ago
- An interactive web-tool for RNA-seq analysis☆68Updated 6 months ago
- An efficient way to guess the library type of your RNA-Seq data.☆32Updated 2 years ago
- B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework☆66Updated this week
- Prepare Sailfish and Salmon output for downstream analysis☆42Updated 6 years ago
- gatk4 RNA variant calling pipeline☆53Updated last week
- Flexible and efficient parsing, interpreting and editing of sequencing reads☆44Updated 3 months ago
- ☆33Updated 3 months ago
- Repository for the Anczukow-Lab splicing pipeline☆16Updated 6 months ago
- A Nextflow Genome-Wide Association Study (GWAS) Pipeline☆35Updated 2 months ago
- Differential gene expression analysis and pathway analysis of RNAseq data☆32Updated 2 months ago
- Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research☆35Updated this week
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 4 years ago
- SeqMonk NGS visualisation and analysis tool☆49Updated 2 weeks ago