carpentries-incubator / workflows-nextflowLinks
Workflow management with Nextflow and nf-core
☆24Updated 6 months ago
Alternatives and similar repositories for workflows-nextflow
Users that are interested in workflows-nextflow are comparing it to the libraries listed below
Sorting:
- An interactive web-tool for RNA-seq analysis☆68Updated 5 months ago
- visual analysis of your VCF files☆36Updated 2 years ago
- ☆31Updated 4 years ago
- A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies☆34Updated last year
- Prepare Sailfish and Salmon output for downstream analysis☆42Updated 6 years ago
- The Zavolab Automated RNA-seq Pipeline☆35Updated 2 weeks ago
- Genomic data interpretation and visualization Workshop☆21Updated 2 weeks ago
- gatk4 RNA variant calling pipeline☆51Updated 3 weeks ago
- GraphBio: a shiny web app to easily perform popular visualization analysis for omics data☆33Updated 2 years ago
- Re-analysis of data provided by Gihawi et al. 2023 bioRxiv☆26Updated 2 years ago
- Useful tools for working with Salmon output☆38Updated 5 years ago
- Master of Pores 2☆23Updated 8 months ago
- pathway based data integration and visualization☆41Updated 4 months ago
- A collection of modules and sub-workflows for Nextflow☆27Updated 2 weeks ago
- An efficient way to guess the library type of your RNA-Seq data.☆31Updated 2 years ago
- ☆34Updated 3 weeks ago
- rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis☆55Updated 2 months ago
- A pipeline to run and systematically evaluate Multiple Sequence Alignment (MSA) methods.☆35Updated last month
- interactive plots for differential expression analysis☆32Updated last month
- Sphinx documentation source for a computational genomics tutorial.☆34Updated 4 years ago
- Variant catalogue pipeline☆25Updated 3 months ago
- A template repository for Snakemake pipepline(s) and a python command-line toolkit.☆28Updated 3 months ago
- Nextflow workflow for automatic repeat detection, classification and masking☆13Updated 7 years ago
- Making bioinformatics fun again☆75Updated 2 months ago
- Flexible and efficient parsing, interpreting and editing of sequencing reads☆43Updated last month
- Hclust2 is a handy tool for plotting heat-maps with several useful options to produce high quality figures that can be used in publicatio…☆12Updated 2 years ago
- A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.☆17Updated 3 months ago
- A collection of scripts to assist in the retrieval of data from the ENA Browser☆87Updated last week
- EditR: an algorithm for simple and cost effective measurement of base editing by quantifying Sanger trace fluorescence☆32Updated last year
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 4 years ago