Alternatives and similar repositories for ibaqpy

Users that are interested in ibaqpy are comparing it to the libraries listed below

• bigbio / pmultiqc
  A library for QC report based on MultiQC framework
  ☆27Updated 2 weeks ago
• nf-core / mhcquant
  Identify and quantify MHC eluted peptides from mass spectrometry raw data
  ☆44Updated last week
• jessegmeyerlab / proteomics-tutorial
  ☆68Updated last year
• kentsislab / UltraQuant
  MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters
  ☆27Updated 7 years ago
• PayneLab / ProteomicsEducation
  ☆40Updated 3 weeks ago
• dincarnato / RNAFramework
  RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
  ☆44Updated 3 weeks ago
• bigbio / quantms
  Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…
  ☆67Updated 2 weeks ago
• evocellnet / funscoR
  R package for functionally scoring phosphorylation sites
  ☆22Updated 6 years ago
• GreiffLab / immuneSIM
  ☆38Updated 2 years ago
• uclahs-cds / package-moPepGen
  Multi-Omics Peptide Generator
  ☆30Updated 3 months ago
• openvax / mhctools
  Python interface to running command-line and web-based MHC binding predictors
  ☆99Updated last year
• GfellerLab / MixMHC2pred
  HLA-II ligand predictor.
  ☆46Updated 2 years ago
• MannLabs / structuremap
  Python package for investigating the structural context of PTMs
  ☆28Updated last year
• fgcz / prolfqua
  Differential Expression Analysis tool box R lang package for omics data
  ☆47Updated last month
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆55Updated 4 months ago
• MSGFPlus / msgfplus
  MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …
  ☆83Updated 3 months ago
• nf-core / quantms
  Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…
  ☆38Updated last year
• wenbostar / PDV
  PDV: an integrative proteomics data viewer
  ☆60Updated this week
• crowelab / PyIR
  Immunoglobulin and T-Cell receptor rearrangement software
  ☆51Updated last month
• yafeng / DEqMS
  DEqMS is a tool for quantitative proteomic analysis
  ☆24Updated 9 months ago
• GfellerLab / PRIME
  PRedictor of IMmunogenic Epitopes
  ☆25Updated 4 months ago
• pFindStudio / pFind3
  ☆28Updated last month
• uio-bmi / compairr
  Comparison of Adaptive Immune Receptor Repertoires
  ☆28Updated last year
• GfellerLab / MixMHCpred
  HLA-I ligand predictor
  ☆43Updated 4 months ago
• bigbio / qpx
  qpx (Quantitative Proteomics eXchange) format (aka quantms.io) a format to capture a full proteomics experiment
  ☆14Updated 2 weeks ago
• Pharmaco-OmicsLab / EasyPubPlot
  Shiny app to easily create publishable plots for scientific papers
  ☆39Updated 6 months ago
• openvax / pepdata
  Python interface to amino acid properties and IEDB
  ☆57Updated last year
• nf-core / epitopeprediction
  A bioinformatics best-practice analysis pipeline for epitope prediction and annotation
  ☆51Updated this week
• saketkc / pyseqlogo
  Python package to plot sequence logos
  ☆29Updated 2 years ago
• nf-core / metaboigniter
  Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.
  ☆25Updated 8 months ago