kkdey / aRchaicLinks
Exploration, clustering, visualization and classification of DNA damage patterns
☆19Updated 4 years ago
Alternatives and similar repositories for aRchaic
Users that are interested in aRchaic are comparing it to the libraries listed below
Sorting:
- A command line tool to compute mapping statistics from a BAM file☆24Updated 3 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- A fast, easy way to present complex bioinformatics pipelines to biologists☆11Updated 6 years ago
- Intersect multiple VCF files with haplotype awareness☆25Updated 4 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Genomic plot in trellis layout☆40Updated last year
- Intro to workflows for efficient automated data analysis, using snakemake.☆32Updated 6 years ago
- Samwell: a python package for using genomic files... well☆20Updated 2 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- A small R package to make sequencing read coverage plots in R.☆38Updated 2 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated last month
- Nanopore Real-Time Analysis Tool☆15Updated 9 months ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 6 years ago
- a set of NGS pipelines☆24Updated this week
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 4 months ago
- FREE Divergence Error-Correcting DNA Barcodes☆9Updated 7 years ago
- Population-based detection of structural variation from High-Throughput Sequencing.☆31Updated 2 years ago
- Sashimi plots for RNA-seq data using detected transcripts☆28Updated 3 months ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆24Updated 9 years ago
- Liftover VCF files☆18Updated 8 years ago
- Flexible Bayesian inference of mutational signatures☆35Updated 2 years ago
- Personal diploid genome creation and coordinate conversion☆29Updated 2 months ago
- Work for the tree sequence inference paper.