APIs for discovering genomics tools, their metadata and their containers
☆34Feb 26, 2026Updated last week
Alternatives and similar repositories for tool-registry-service-schemas
Users that are interested in tool-registry-service-schemas are comparing it to the libraries listed below
Sorting:
- The WES API is a standard way to run and manage portable workflows.☆89Feb 20, 2026Updated 2 weeks ago
- ☆93Feb 25, 2026Updated last week
- Trigger the Google Genomics Pipeline API with CWL☆11Feb 7, 2017Updated 9 years ago
- An app store for scientific workflows, tools, notebooks, and services☆131Mar 1, 2026Updated last week
- Import and run CWL workflows on DNAnexus (alpha)☆13Sep 12, 2018Updated 7 years ago
- A repository for the schemas used for the Data Repository Service.☆63Jan 12, 2026Updated last month
- [DEPRECATED] - A GA4GH Task Execution Service (TES) compatible implementation for Azure Compute☆18Sep 29, 2023Updated 2 years ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Aug 9, 2018Updated 7 years ago
- ☆11Oct 21, 2016Updated 9 years ago
- Parallel Recipes : parallel workflow execution made easy☆13Sep 1, 2015Updated 10 years ago
- Image and VM management for Jenkins, Spark and Mesos clusters in EC2☆22Jul 24, 2020Updated 5 years ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆21Nov 7, 2022Updated 3 years ago
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows☆38Feb 5, 2026Updated last month
- A fast, parallel, streaming multipart uploader for S3☆14Mar 23, 2017Updated 8 years ago
- Pipeline for poreathon☆14Dec 17, 2014Updated 11 years ago
- Automated CWL and Galaxy XML generation for Python tools that use argparse and click☆11Jul 29, 2019Updated 6 years ago
- succinct labeled graphs with collections and paths☆15Nov 18, 2018Updated 7 years ago
- Funnel is a toolkit for distributed task execution via a simple, standard API.☆137Updated this week
- Framework for testing CWL tools and workflows☆20Feb 4, 2026Updated last month
- Convert CWL to WDL☆17Oct 17, 2016Updated 9 years ago
- Seven Bridges Python library for programatic generation of CWL workflows.☆21Oct 26, 2022Updated 3 years ago
- Decentralized distributed database of genomic and clinical data.☆40Aug 3, 2018Updated 7 years ago
- Workflow Execution Service Backend☆20Updated this week
- Docker images of bioinformatics software☆21Jun 15, 2017Updated 8 years ago
- [Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0☆75Nov 18, 2020Updated 5 years ago
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 3 months ago
- Typescript data model for Common Workflow Language☆55Mar 3, 2023Updated 3 years ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆25Updated this week
- Design specs and prototypes for the HCA Data Storage System (DSS, "blue box")☆41Feb 12, 2026Updated 3 weeks ago
- EXPERIMENTAL implementation of side graph☆10Apr 16, 2015Updated 10 years ago
- A collection of cwl-ica workflows along with a user guide for the commands to use and contributions guide☆13Feb 10, 2026Updated last month
- VIPER (Variant InsPector and Expert Rating tool) can be utilised to view variant calls and decide whether or not those are true or false …☆16Jan 17, 2022Updated 4 years ago
- Run-length compressed BWT with LZ77 sampled suffix array☆10Apr 25, 2022Updated 3 years ago
- Registration of Galaxy Tools in Elixir☆12Jan 7, 2019Updated 7 years ago
- IPython notebooks to teach Genomics and Population Genetics☆21Feb 13, 2017Updated 9 years ago
- An implementation of Nextflow.io with Language Workbench Technology. The project helps create computational pipelines that run with the N…☆22Aug 9, 2016Updated 9 years ago
- Recommendations to contenarized your bioinformatics software☆12May 30, 2018Updated 7 years ago
- Generating tool descriptors from bio.tools☆10Jun 13, 2018Updated 7 years ago
- ☆12Jun 18, 2022Updated 3 years ago