ga4gh / tool-registry-service-schemas
APIs for discovering genomics tools, their metadata and their containers
☆30Updated 2 months ago
Alternatives and similar repositories for tool-registry-service-schemas:
Users that are interested in tool-registry-service-schemas are comparing it to the libraries listed below
- ☆11Updated 8 years ago
- conda recipes for genomic data☆85Updated 3 years ago
- ☆82Updated 2 months ago
- Workflow Description Language compiler for the DNAnexus platform☆40Updated last year
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows☆36Updated 6 months ago
- Butler is a framework for running scientific workflows on public and academic clouds.☆69Updated 4 years ago
- R tools to interact with hap.py output☆15Updated 5 years ago
- WDL plugin for pytest☆48Updated last year
- A repository for the schemas used for the Data Repository Service.☆60Updated 2 months ago
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 6 years ago
- normalize, left-align, trim, validate and clean VCF files☆20Updated 9 years ago
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 3 years ago
- Analysis Framework for Biological Data from High Throughput Experiments☆34Updated 8 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Updated 6 years ago
- software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis☆31Updated 2 years ago
- An open-source, cloud-ready web application for simplified deployment of big data workflows.☆33Updated 6 months ago
- ☆35Updated last year
- Docker images of bioinformatics software☆21Updated 7 years ago
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆21Updated last week
- Aligner for sequencing data☆18Updated 6 years ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆41Updated last year
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Updated last month
- Curated collection of open-source bioinformatics tools☆28Updated 5 years ago
- robust matching of small variant datasets using flexible scoring schemes☆10Updated 4 years ago
- Python client for GA4GH htsget protocol☆15Updated 2 years ago
- PathOS is a clinical application for filtering, analysing and reporting on NGS variants☆28Updated 3 years ago
- Retrieve data in genomic intervals with a Python interface for tabix.☆83Updated 7 years ago
- FLS Galaxy tools and tool-wrappers for in-house and third-party bioinformatic applications.☆14Updated 9 months ago
- DEPRECIATED! Please use nf-core/tools instead☆19Updated 6 years ago