Data Science Operations (dso) command line tool
☆48Jun 15, 2026Updated last week
Alternatives and similar repositories for dso
Users that are interested in dso are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Minibatch loading for on-disk anndata files, co-developed by Lamin Labs and scverse☆67Updated this week
- ☆17Jun 17, 2021Updated 5 years ago
- Genomic Features in Python from BioConductor's AnnotationHub☆23Updated this week
- Recommendations to contenarized your bioinformatics software☆12May 30, 2018Updated 8 years ago
- fastVEP: High-performance Variant Effect Predictor in Rust☆103Jun 16, 2026Updated last week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆12Apr 5, 2022Updated 4 years ago
- Build contrasts for models defined with formulaic☆13Updated this week
- Differential gene expression analysis and pathway analysis of RNAseq data☆32Jul 3, 2025Updated 11 months ago
- Access public biological ontologies.☆14Aug 7, 2024Updated last year
- TMARKER is a software for cancer cell nucleus detection, segmentation, counting, and classification.☆14Feb 22, 2017Updated 9 years ago
- Customer workshop materials☆19May 13, 2026Updated last month
- ☆21Jul 17, 2024Updated last year
- Simple test framework for Nextflow pipelines☆188Apr 27, 2026Updated 2 months ago
- PROGENY Python implementation☆12Apr 5, 2022Updated 4 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Single-cell Lung Cancer Atlas with 1.2M cells☆93Jan 19, 2025Updated last year
- Analysis pipeline to model tumour clonal evolution from WGS data (driver annotation, quality control of copy number calls, subclonal and …☆22Jun 8, 2026Updated 3 weeks ago
- Simulate single-cell RNA-SEQ data using the Splatter statistical framework but implemented in python. In addition, simulate doublet cells…☆30Oct 16, 2021Updated 4 years ago
- Snakemake workflow for bacterial genome assembly + polishing for Oxford Nanopore (ONT) sequencing using multiple tools.☆29May 7, 2026Updated last month
- UMCU Genetics Nextflow modules☆30Oct 25, 2024Updated last year
- Generic SDK and CLI for GA4GH API services☆15Feb 2, 2026Updated 4 months ago
- For computational analysis of bacterial RNA-seq data☆12Jul 14, 2017Updated 8 years ago
- ☆10Oct 31, 2023Updated 2 years ago
- pixi-to-conda-lock converts a pixi.lock file to a conda-lock.yml file☆16Jun 19, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Biology-centered data-driven quality control for scRNA-seq☆21May 22, 2023Updated 3 years ago
- nf-core/references is a bioinformatics pipeline that build references, for multiple use cases☆20Jun 11, 2026Updated 2 weeks ago
- A bioinformatics best-practice analysis pipeline for the analysis of shallow whole genome sequencing (sWGS) data for the identification o…☆15Jun 5, 2026Updated 3 weeks ago
- Predict genic elements as splice sites, exons or genes, along eukaryotic DNA sequences☆18Jan 19, 2023Updated 3 years ago
- A method to improve mappings on circular genomes, using the BWA mapper☆11Mar 4, 2022Updated 4 years ago
- ☆13Mar 12, 2020Updated 6 years ago
- ☆14Jun 3, 2022Updated 4 years ago
- An analysis pipeline for long-reads from both PacBio and Oxford Nanopore Technologies (ONT), written in Nextflow.☆68Jun 15, 2026Updated last week
- ☆11Mar 4, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- drunk on perbase pileups and lua expressions☆19Nov 15, 2025Updated 7 months ago
- Convert bioinformatics file formats to Zarr☆47Jun 4, 2026Updated 3 weeks ago
- Normalization for single cell RNA-seq data☆10Aug 25, 2022Updated 3 years ago
- factor models for omics data☆44Jun 22, 2026Updated last week
- ☆17Jun 15, 2026Updated 2 weeks ago
- Julia interface to ViennaRNA for RNA structure prediction and analysis☆23Apr 16, 2024Updated 2 years ago
- Annotated sequence data☆11Feb 2, 2025Updated last year