Data Science Operations (dso) command line tool
☆48Jun 15, 2026Updated 3 months ago
Alternatives and similar repositories for dso
Users that are interested in dso are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Slides and Notebooks for scverse 2024☆16Sep 24, 2024Updated last year
- Customer workshop materials☆19May 13, 2026Updated 4 months ago
- LLM-powered personalized daily lists of scientific papers☆135Jan 13, 2026Updated 8 months ago
- nf-test utility functions☆13Updated this week
- High-Performance Sparse Matrix Library☆19Nov 23, 2025Updated 9 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Fast array utilities☆15Updated this week
- A single cell transcriptomics pipeline for QC, integration and making the data presentable☆115Updated this week
- Simple test framework for Nextflow pipelines☆191Apr 27, 2026Updated 4 months ago
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆56Updated this week
- Experimental plugin to integrate GPT like prompt into Nextflow☆17Apr 15, 2024Updated 2 years ago
- Genomic Features in Python from BioConductor's AnnotationHub☆22Updated this week
- Recommendations to contenarized your bioinformatics software☆12May 30, 2018Updated 8 years ago
- ☆17Jun 17, 2021Updated 5 years ago
- An analysis pipeline for Nanostring nCounter expression data.☆18Sep 11, 2026Updated last week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Differential gene expression analysis and pathway analysis of RNAseq data☆32Jul 3, 2025Updated last year
- Test data to be used for automated testing with the nf-core pipelines☆164Updated this week
- A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted nex…☆63Sep 11, 2026Updated last week
- Predict genic elements as splice sites, exons or genes, along eukaryotic DNA sequences☆18Jul 18, 2026Updated 2 months ago
- Fast, self-contained VCF to MAF converter with embedded annotation (Rust rewrite of vcf2maf)☆24Jun 23, 2026Updated 2 months ago
- A collection of Groovy classes that provide utility services to nextflow pipelines.☆13Oct 25, 2022Updated 3 years ago
- Python-based framework for computational immunomics☆15Jun 11, 2026Updated 3 months ago
- Command line tool for Wave containers provisioning service☆19Updated this week
- [On-CRAN] All your shinylive apps are belong to us☆17Jun 26, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A modest re-desing update for the classic FastQC report.☆30Sep 2, 2025Updated last year
- Snakemake workflow for bacterial genome assembly + polishing for Oxford Nanopore (ONT) sequencing using multiple tools.☆29May 7, 2026Updated 4 months ago
- ☆12Apr 5, 2022Updated 4 years ago
- A rust implementation of STAR☆75Updated this week
- A proof of concept daisy-chaining Nextflow workflows☆35Updated this week
- Logging of scripts suitable for clinical trials☆19Jul 6, 2026Updated 2 months ago
- A curated collection of Nextflow implementation patterns☆373Nov 21, 2023Updated 2 years ago
- Master of Pores 2☆23Dec 4, 2024Updated last year
- ☆22Jul 17, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines☆57Aug 24, 2026Updated 3 weeks ago
- Please consider using/contributing to https://github.com/nf-core/sarek☆41Jul 13, 2021Updated 5 years ago
- A Nextflow pipeline for genome and pan-genome annotation☆16Feb 22, 2026Updated 6 months ago
- Build contrasts for models defined with formulaic☆13Updated this week
- Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq☆95Sep 8, 2026Updated last week
- Biology-centered data-driven quality control for scRNA-seq☆21May 22, 2023Updated 3 years ago
- Params validation plugin for Nextflow pipelines☆48Aug 7, 2024Updated 2 years ago