A Memory-efficient, Visualization-enhanced, and Parallel-accelerated Tool For Genome-Wide Association Study
☆326Mar 11, 2026Updated last month
Alternatives and similar repositories for rMVP
Users that are interested in rMVP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Genome Association Predict Integrate Tools☆224Mar 10, 2026Updated last month
- 📊 Circular and Rectangular Manhattan Plot☆630Feb 25, 2026Updated last month
- HIBLUP is an Integration of Statistical Methods Under BLUP Framework for Genomic Selection and Prediction☆29Oct 15, 2021Updated 4 years ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆39Mar 24, 2025Updated last year
- Data Simulation for Life Science and Breeding☆42Jun 13, 2025Updated 10 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies☆57Sep 6, 2025Updated 7 months ago
- Code to compute the XP-CLR statistic to infer natural selection☆106Jun 13, 2022Updated 3 years ago
- Kinship Adjusted Multi-Loci Best Linear Unbiased Prediction☆47Apr 8, 2025Updated last year
- LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files☆207Jul 5, 2025Updated 9 months ago
- A haplotype analysis toolkit for natural variation study.☆31Oct 3, 2023Updated 2 years ago
- PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files☆205Aug 15, 2024Updated last year
- Model training for ISwine☆14Jun 9, 2020Updated 5 years ago
- Detailed bioinformatics scripts and methods used in the NAM genome paper.☆91Jan 14, 2025Updated last year
- Example for TWAS☆12Jan 23, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- The R tool associated with 3VmrMLM, a comprehensive GWAS method for identifying QTNs, QTN-by-environment interactions, and QTN-by-QTN int…☆35Dec 29, 2025Updated 3 months ago
- ☆11Mar 14, 2026Updated last month
- Reliable Association INference By Optimizing Weights with R (R package for SNP-set GWAS and multi-kernel mixed model)☆24Sep 26, 2025Updated 6 months ago
- Genome-wide Efficient Mixed Model Association☆397Dec 10, 2025Updated 4 months ago
- An innovative GWAS procedure for studies on germplasm population and plant breeding☆14Nov 16, 2020Updated 5 years ago
- ☆114Oct 3, 2025Updated 6 months ago
- Build haplotye and generate figures☆19Nov 4, 2025Updated 5 months ago
- 二代测序数据分析☆379Dec 6, 2023Updated 2 years ago
- scripts for the project of seven thaliana genomes assembly☆42May 22, 2021Updated 4 years ago
- Deploy open-source AI quickly and easily - Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Bulked-Segregant Analysis using vcf file with or without parents☆33Apr 1, 2026Updated 2 weeks ago
- VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Forma…☆104Aug 27, 2025Updated 7 months ago
- PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files☆30Aug 15, 2024Updated last year
- This tutorial is a guide to perform TWAS with the data used in Torres‐Rodríguez, J. Vladimir, et al. "Population‐level gene expression ca…☆23Feb 23, 2026Updated last month
- Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis☆333Jul 7, 2023Updated 2 years ago
- ☆18Feb 15, 2024Updated 2 years ago
- ☆36Jan 22, 2022Updated 4 years ago
- Scripts to do haplotype analysis on pan genomes.☆20Sep 24, 2020Updated 5 years ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆111Mar 13, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆21Nov 15, 2024Updated last year
- PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a …☆13Dec 12, 2024Updated last year
- QTLseqr is an R package for QTL mapping using NGS Bulk Segregant Analysis☆83Jan 20, 2020Updated 6 years ago
- Python library to facilitate genome assembly, annotation, and comparative genomics☆899Apr 2, 2026Updated last week
- ☆12Apr 10, 2021Updated 5 years ago
- Fast calculation of Patterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species☆186Dec 19, 2024Updated last year
- ☆44May 8, 2024Updated last year