Alternatives and similar repositories for CandiHap:

Users that are interested in CandiHap are comparing it to the libraries listed below

• xukaili / CandiHap
  A haplotype analysis toolkit for natural variation study.
  ☆29Updated last year
• weigelworld / pan-nlrome
  The GitHub repository for the A. thaliana pan-NLR'ome project.
  ☆16Updated 5 years ago
• caulilin / QTG_Seq
  ☆21Updated 6 years ago
• xuzhougeng / binmapr
  R package for binmap
  ☆13Updated last year
• biozzq / goat-population-genetic
  Main scripts and commands used to analyze goat population genetic and domestication
  ☆20Updated 5 years ago
• Menggg / BLINK
  BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions
  ☆34Updated 2 months ago
• YaoLab-Bioinfo / binQTL
  QTL mapping with binmap data
  ☆17Updated 5 years ago
• xiekunwhy / bsa
  Bulked-Segregant Analysis using vcf file with or without parents
  ☆25Updated 2 months ago
• GaoLei-bio / SV
  ☆14Updated 3 years ago
• wheatgenetics / owwc
  repository for code used in analysis of open wild wheat consortium
  ☆15Updated 3 years ago
• yingjiexiao / maizeG2P
  ☆12Updated 3 years ago
• xhhuanglab / QTN_scripts
  ☆9Updated 4 years ago
• baduelp / public
  ☆16Updated 4 months ago
• LAILAB-CAU / update-Mo17
  ☆23Updated last year
• melop / killigenomics
  Killifish genomics scripts
  ☆12Updated 4 years ago
• Iceylee / NGS-Pacbio
  Pipelines and scripts for analysing RNA-seq，genome and other sequecing data.
  ☆9Updated 5 years ago
• shuliliu / cattleGTEx
  The cattle Genotype-Tissue Expression atlas v1
  ☆23Updated last year
• ksiewert / BetaScan
  Genome-wide scan for balancing selection using beta statistic
  ☆28Updated last year
• schneebergerlab / AMPRIL-genomes
  scripts for the project of seven thaliana genomes assembly
  ☆38Updated 3 years ago
• Wendellab / CisTransRegulation
  Project description and analytic scripts for cis/trans regulation of fiber development in G. hirsutum
  ☆16Updated last year
• xuzhougeng / wgap
  Whole Genome Annotation Pipeline
  ☆15Updated 11 months ago
• yiliao1022 / LASTZ_SV_pipeline
  ☆16Updated 5 years ago
• HuffordLab / Wang_et_al._Demography
  Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"
  ☆17Updated 4 years ago
• liangjiaoxue / PythonNGSTools
  Scripts for NGS processing
  ☆17Updated 7 years ago
• evodify / genotype-files-manipulations
  Set of scripts to manupulate tab-delimited genotype calls files as well as to convert calls-files to other popular formats.
  ☆10Updated 4 years ago
• zlguu / Rice_Heterosis
  ☆15Updated last year
• itojal / hot_scan
  hot_scan is a free software to detect genomic regions unusually rich (hotspot) in a given pattern via scan statistics
  ☆7Updated 11 years ago
• GouXiangJian / SSRMMD
  SSRMMD: A Rapid and Accurate Algorithm for Mining SSR Feature Loci and Candidate Polymorphic SSRs Based on Assembled Sequences.
  ☆14Updated 4 years ago
• Zhanmengtao / bin
  scripts
  ☆15Updated 6 years ago
• xuechantian / Plant-LncRNA-pipline
  ☆11Updated 7 months ago