bmansfeld / QTLseqrLinks
QTLseqr is an R package for QTL mapping using NGS Bulk Segregant Analysis
☆82Updated 5 years ago
Alternatives and similar repositories for QTLseqr
Users that are interested in QTLseqr are comparing it to the libraries listed below
Sorting:
- MutMap pipeline to identify causative mutations responsible for a phenotype☆61Updated 10 months ago
- A pipeline to generate a phylogenetic tree from huge SNP data☆92Updated last year
- PacBio Assembly Tool Suite: Reads in ⇨ Assembly out☆118Updated 5 years ago
- QTL-seq pipeline to identify causative mutations responsible for a phenotype☆57Updated 10 months ago
- NLR-Annotator upload☆75Updated 2 years ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆106Updated 2 weeks ago
- ☆83Updated last year
- TransposonUltimate - a holistic set of tools for transposon identification☆84Updated 3 years ago
- A set of functions to visualise genotypes based on a VCF☆87Updated 3 years ago
- A library for running k-mers based GWAS☆122Updated last year
- VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Forma…☆100Updated 3 months ago
- Workflow for Building Microsynteny Networks☆58Updated 3 years ago
- ☆75Updated 5 years ago
- Genomic related tools☆73Updated 4 years ago
- Same species annotation lift over pipeline.☆98Updated 2 years ago
- A pipeline used to identify different modes of duplicated gene pairs☆114Updated 4 months ago
- This script will extract the intron feature gff3 and sequence from gene_exon gff3 and fasta file.☆33Updated 7 years ago
- ☆95Updated 4 years ago
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆84Updated 4 years ago
- Detailed bioinformatics scripts and methods used in the NAM genome paper.☆86Updated 10 months ago
- ☆71Updated 5 years ago
- Dfam Transposable Element Tools Docker container.☆101Updated last month
- Haplotype based scans for selection☆137Updated last month
- web documentation for Trinotate☆48Updated 2 years ago
- Code to compute the XP-CLR statistic to infer natural selection☆101Updated 3 years ago
- A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles - fo…☆110Updated 5 months ago
- MitoFinder: efficient automated large-scale extraction of mitogenomic data from high throughput sequencing data☆111Updated 3 months ago
- Collection of tools for the analysis of CpG data☆101Updated 5 months ago
- Application of pan-genome for population☆115Updated last month
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…☆53Updated 5 years ago