bmansfeld / QTLseqrLinks
QTLseqr is an R package for QTL mapping using NGS Bulk Segregant Analysis
☆77Updated 5 years ago
Alternatives and similar repositories for QTLseqr
Users that are interested in QTLseqr are comparing it to the libraries listed below
Sorting:
- QTL-seq pipeline to identify causative mutations responsible for a phenotype☆55Updated 4 months ago
- NLR-Annotator upload☆68Updated last year
- Genomic related tools☆71Updated 3 years ago
- PacBio Assembly Tool Suite: Reads in ⇨ Assembly out☆118Updated 4 years ago
- A pipeline used to identify different modes of duplicated gene pairs☆102Updated 3 months ago
- MutMap pipeline to identify causative mutations responsible for a phenotype☆54Updated 4 months ago
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆80Updated 4 years ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆92Updated 7 months ago
- Same species annotation lift over pipeline.☆97Updated last year
- Workflow for Building Microsynteny Networks☆55Updated 2 years ago
- This script will extract the intron feature gff3 and sequence from gene_exon gff3 and fasta file.☆33Updated 6 years ago
- VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Forma…☆96Updated last month
- ☆79Updated 11 months ago
- A pipeline to generate a phylogenetic tree from huge SNP data☆88Updated last year
- ☆20Updated 5 years ago
- Toolkits Integrated for Genetic and Evolutionary Research☆17Updated last month
- Meta-pipeline to identify transposable element insertions using next generation sequencing data☆100Updated 3 weeks ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆57Updated 2 years ago
- A library for running k-mers based GWAS☆109Updated 7 months ago
- This is an archive version of old RepBase library (v20170127) for RepeatMasker.☆36Updated 4 years ago
- Genome annotation pipeline☆59Updated last year
- Here, we sequence and de novo assemble chromosome-scale genomes of nine wild species and two cultivated accessions of tomato and construc…☆54Updated last year
- ☆71Updated 5 years ago
- Tools for working with second gen assemblies, fasta sequences, etc☆93Updated 8 years ago
- Useful bioinformatic scripts☆57Updated 7 months ago
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…☆51Updated 5 years ago
- DNA序列比对结果 可视化展示工具☆52Updated 2 years ago
- A novel genome assembly pipeline based on deep learning☆62Updated 6 months ago
- A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles - fo…☆101Updated last week
- Code to compute the XP-CLR statistic to infer natural selection☆98Updated 3 years ago