gdlc / BGLR-R

Related projects ⓘ

Alternatives and complementary repositories for BGLR-R

• YinLiLin / hibayes
  Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies
  ☆48Updated 10 months ago
• perpdgo / lme4GS
  lme4 for Genomic Selection
  ☆16Updated 3 years ago
• grunwaldlab / Population_Genetics_in_R
  A primer for computational tools to analyze genetics of populations in R
  ☆85Updated 3 years ago
• royfrancis / pophelper
  An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
  ☆142Updated last year
• YinLiLin / KAML
  Kinship Adjusted Multi-Loci Best Linear Unbiased Prediction
  ☆41Updated last year
• dipetkov / eems
  Estimating Effective Migration Surfaces
  ☆102Updated last year
• cooplab / Popgen_EVE102_2012
  Pdfs of slides from 2018 popgen course
  ☆35Updated 5 years ago
• silastittes / shiny_popgen
  Shiny apps for teaching Population Genetics
  ☆59Updated last year
• dentearl / structureHarvester
  Structure Harvester is a program for parsing the output of Pritchard's STRUCTURE and for performing the Evanno method.
  ☆26Updated 2 years ago
• thibautjombart / adegenet
  adegenet: a R package for the multivariate analysis of genetic markers
  ☆168Updated 2 months ago
• roblanf / sangeranalyseR
  functions to analyse sanger sequencing reads in R
  ☆97Updated 7 months ago
• szpiech / selscan
  Haplotype based scans for selection
  ☆114Updated 3 weeks ago
• jiabowang / GAPIT
  Genome Association Predict Integrate Tools
  ☆175Updated 2 weeks ago
• MarcooLopez / Genomic-Selection
  ☆23Updated 3 years ago
• emmanuelparadis / pegas
  Population and Evolutionary Genetics Analysis System
  ☆28Updated 4 months ago
• whussain2 / Analysis-pipeline
  ☆34Updated 2 years ago
• JimWhiting91 / genotype_plot
  A set of functions to visualise genotypes based on a VCF
  ☆84Updated 2 years ago
• kholsinger / Lecture-Notes-in-Population-Genetics
  LaTeX and associated files for lecture notes used in EEB 5348 at the University of Connecticut
  ☆32Updated 11 months ago
• jpuritz / dDocent
  a bash pipeline for RAD sequencing
  ☆52Updated 6 months ago
• amkusmec / FarmCPUpp
  Perform GWAS using the FarmCPU model.
  ☆22Updated 2 years ago
• guilherme-pereira / QTLpoly
  R package for random-effect multiple QTL mapping in autopolyploids
  ☆9Updated 3 years ago
• samuelbfernandes / simplePHENOTYPES
  Simulation of Pleiotropic, Linked and Epistatic Phenotypes
  ☆12Updated 8 months ago
• syntheke / bayesR
  Bayesian hierarchical model for complex trait analysis
  ☆44Updated 9 months ago
• voichek / kmersGWAS
  A library for running k-mers based GWAS
  ☆106Updated 3 weeks ago
• pgugger / LandscapeGenomics
  Tutorials for bioinformatics and data analysis related to landscape genomics
  ☆26Updated 5 years ago
• masuday / Blupf90TutorialStandard
  A tutorial of the BLUPF90 family programs
  ☆18Updated 5 years ago
• slowkoni / rfmix
  RFMIX - Local Ancestry and Admixture Inference Version 2
  ☆80Updated last year
• TickingClock1992 / RIdeogram
  ☆163Updated 4 years ago
• popsim-consortium / stdpopsim
  A library of standard population genetic models
  ☆126Updated 2 months ago
• jendelman / GWASpoly
  GWAS software that can handle autopolyploids
  ☆26Updated last month