Alternatives and similar repositories for BGLR-R

Users that are interested in BGLR-R are comparing it to the libraries listed below

• perpdgo / lme4GS
  lme4 for Genomic Selection
  ☆18Updated 4 years ago
• royfrancis / pophelper
  An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
  ☆150Updated 2 years ago
• thibautjombart / adegenet
  adegenet: a R package for the multivariate analysis of genetic markers
  ☆193Updated 6 months ago
• dipetkov / eems
  Estimating Effective Migration Surfaces
  ☆105Updated last year
• grunwaldlab / Population_Genetics_in_R
  A primer for computational tools to analyze genetics of populations in R
  ☆88Updated 4 years ago
• samuelbfernandes / simplePHENOTYPES
  Simulation of Pleiotropic, Linked and Epistatic Phenotypes
  ☆13Updated last year
• stephenturner / qqman
  An R package for creating Q-Q and manhattan plots from GWAS results
  ☆169Updated last year
• MarcooLopez / Genomic-Selection
  ☆25Updated 4 years ago
• zhengxwen / SNPRelate
  R package: parallel computing toolset for relatedness and principal component analysis of SNP data (Development version only)
  ☆108Updated this week
• silastittes / shiny_popgen
  Shiny apps for teaching Population Genetics
  ☆65Updated 2 years ago
• cooplab / Popgen_teaching_code
  ☆52Updated 3 years ago
• YinLiLin / hibayes
  Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies
  ☆50Updated 4 months ago
• TickingClock1992 / RIdeogram
  ☆179Updated 4 years ago
• cooplab / Popgen_EVE102_2012
  Pdfs of slides from 2018 popgen course
  ☆36Updated 6 years ago
• YinLiLin / KAML
  Kinship Adjusted Multi-Loci Best Linear Unbiased Prediction
  ☆44Updated 4 months ago
• jiabowang / GAPIT
  Genome Association Predict Integrate Tools
  ☆209Updated this week
• lawremi / ggbio
  Grid and ggplot2 based visualization for biological data
  ☆114Updated 3 weeks ago
• popsim-consortium / stdpopsim
  A library of standard population genetic models
  ☆135Updated last week
• YaoLab-Bioinfo / shinyCircos
  an R/shiny application for creation of Circos plot interactively
  ☆158Updated 2 years ago
• knausb / vcfR
  Tools to work with variant call format files
  ☆261Updated 6 months ago
• quinlan-lab / sllobs-biostats
  ☆72Updated 3 years ago
• showteeth / ggcoverage
  Visualize and annotate genomic coverage with ggplot2
  ☆261Updated 7 months ago
• Rpedigree / pedigreeTools
  R functions related to pedigrees
  ☆14Updated last year
• roblanf / sangeranalyseR
  functions to analyse sanger sequencing reads in R
  ☆101Updated 5 months ago
• uqrmaie1 / admixtools
  ☆83Updated 2 months ago
• dzhang32 / ggtranscript
  Visualizing transcript structure and annotation using ggplot2
  ☆158Updated last year
• syntheke / bayesR
  Bayesian hierarchical model for complex trait analysis
  ☆44Updated last year
• jendelman / polyBreedR
  Using genome-wide markers for polyploid breeding
  ☆11Updated 2 weeks ago
• KlausVigo / phangorn
  Phylogenetic analysis in R
  ☆208Updated last month
• MerrimanLab / selectionTools
  Pipeline to take VCF through to Selection Analysis.
  ☆58Updated 2 years ago