gdlc / BGLR-R

Related projects: ⓘ

• grunwaldlab / Population_Genetics_in_R
  A primer for computational tools to analyze genetics of populations in R
  ☆84Updated 3 years ago
• YinLiLin / hibayes
  Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies
  ☆46Updated 8 months ago
• royfrancis / pophelper
  An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
  ☆139Updated last year
• perpdgo / lme4GS
  lme4 for Genomic Selection
  ☆16Updated 3 years ago
• dipetkov / eems
  Estimating Effective Migration Surfaces
  ☆103Updated 10 months ago
• cooplab / Popgen_EVE102_2012
  Pdfs of slides from 2018 popgen course
  ☆35Updated 5 years ago
• silastittes / shiny_popgen
  Shiny apps for teaching Population Genetics
  ☆58Updated last year
• TickingClock1992 / RIdeogram
  ☆157Updated 3 years ago
• whussain2 / Analysis-pipeline
  ☆32Updated 2 years ago
• YinLiLin / KAML
  Kinship Adjusted Multi-Loci Best Linear Unbiased Prediction
  ☆40Updated last year
• zhengxwen / SNPRelate
  R package: parallel computing toolset for relatedness and principal component analysis of SNP data (Development version only)
  ☆98Updated last week
• szpiech / selscan
  Haplotype based scans for selection
  ☆111Updated last month
• david-barnett / microViz
  R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.
  ☆100Updated last week
• thibautjombart / adegenet
  adegenet: a R package for the multivariate analysis of genetic markers
  ☆166Updated last year
• jiabowang / GAPIT
  Genome Association Predict Integrate Tools
  ☆164Updated last week
• showteeth / ggcoverage
  Visualize and annotate genomic coverage with ggplot2
  ☆224Updated 3 months ago
• gaynorr / AlphaSimR
  R package for breeding program simulations
  ☆43Updated last week
• MarcooLopez / Genomic-Selection
  ☆23Updated 3 years ago
• voichek / kmersGWAS
  A library for running k-mers based GWAS
  ☆100Updated last year
• roblanf / sangeranalyseR
  functions to analyse sanger sequencing reads in R
  ☆96Updated 5 months ago
• jendelman / StageWise
  two-stage analysis of multi-environment trials for genomic selection and GWAS
  ☆18Updated last month
• jpuritz / dDocent
  a bash pipeline for RAD sequencing
  ☆52Updated 4 months ago
• syntheke / bayesR
  Bayesian hierarchical model for complex trait analysis
  ☆45Updated 7 months ago
• stefpeschel / NetCoMi
  Network construction, analysis, and comparison for microbial compositional data
  ☆148Updated last month
• mhahsler / rBLAST
  Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package
  ☆103Updated 4 months ago
• guilherme-pereira / QTLpoly
  R package for random-effect multiple QTL mapping in autopolyploids
  ☆9Updated 2 years ago
• FrederickHuangLin / ANCOMBC
  Differential abundance (DA) and correlation analyses for microbial absolute abundance data
  ☆104Updated 3 weeks ago
• popsim-consortium / stdpopsim
  A library of standard population genetic models
  ☆122Updated last month
• statdivlab / corncob
  Count Regression for Correlated Observations with the Beta-binomial
  ☆102Updated 2 weeks ago
• YuLab-SMU / ggtreeExtra
  Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”
  ☆86Updated 4 months ago