GOMAP-Singularity is the containerized version of GOMAP
☆11Jul 16, 2023Updated 3 years ago
Alternatives and similar repositories for GOMAP-singularity
Users that are interested in GOMAP-singularity are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Gmove is a gene prediction tool☆21Oct 9, 2024Updated last year
- ☆21May 27, 2024Updated 2 years ago
- A JBrowse plugin for viewing GWAS data☆13Feb 13, 2022Updated 4 years ago
- Long Read Based SV Calling Tools Analysis☆14Mar 22, 2024Updated 2 years ago
- scripts for the project of seven thaliana genomes assembly☆42May 22, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Plant small RNA target prediction tool☆27Dec 19, 2016Updated 9 years ago
- Identification of differentially methylated regions between multiple epigenomes from BS-treated read mappings via methylated region calli…☆13Sep 1, 2023Updated 2 years ago
- Whole organelle genome-wide alignment construction method, which ultilizes BLAST tool, to facilitate phylogeny analysis☆15Aug 27, 2023Updated 2 years ago
- HiC-Hiker: A probabilistic model to determine contig orientation in chromosome-length scaffolds with Hi-C☆26Jan 14, 2021Updated 5 years ago
- A pipeline for assemble chroloplast genome using short/long reads☆11Mar 31, 2022Updated 4 years ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆47May 27, 2022Updated 4 years ago
- Knowledge-based Identification of Pathway Enzymes (KIPEs) performs an automatic annotation of the flavonoid biosynthesis steps in a new t…☆17Jun 23, 2026Updated last month
- ☆20Apr 24, 2022Updated 4 years ago
- iTAK☆49Apr 8, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Nextflow pipeline for scaffolding genome assemblies with Hi-C reads☆16Nov 5, 2025Updated 8 months ago
- Genome annotation pre-publication results☆36Jun 19, 2026Updated last month
- Polyploid-aware, multiscale super-pangenome graph strategy☆21Oct 29, 2025Updated 8 months ago
- An Interactive Desktop Platform for Drawing Gene Structure and Protein Architecture☆23Aug 8, 2025Updated 11 months ago
- Automated pipeline for enrichment analysis in non-model organisms !☆16Feb 8, 2026Updated 5 months ago
- To tackle the exponentially increasing throughput of Next-Generation Sequencing (NGS), most of the existing short-read aligners can be co…☆31Dec 26, 2023Updated 2 years ago
- SINE annotation tool for plant genomes☆19Jan 21, 2024Updated 2 years ago
- RepeatIdentifier☆74Mar 19, 2025Updated last year
- Galaxy Wrappers and helpers for the MISA ttols☆11Oct 11, 2014Updated 11 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- TEsorter: an accurate and fast method to classify LTR-retrotransposons in plant genomes☆114Nov 17, 2025Updated 8 months ago
- A tool for discovering transposable elements and describing patterns of genome evolution☆32Apr 23, 2023Updated 3 years ago
- High throughput python tool for mining and analysis of gene duplications.☆16Mar 24, 2026Updated 4 months ago
- Long Reads Annotation pipeline☆71Mar 31, 2022Updated 4 years ago
- ☆10Oct 17, 2019Updated 6 years ago
- The TEA-GCN pipeline to construct gene co-functional and co-regulatory networks from public transcriptomes using condition-specific ensem…☆19May 11, 2026Updated 2 months ago
- CleaveLand4: Analysis of degradome data to find sliced miRNA and siRNA targets☆21Mar 28, 2021Updated 5 years ago
- Obsolete!! Begin to turn to PrimerServer2☆10Jul 22, 2019Updated 7 years ago
- The website for bioboxes☆11Jun 9, 2017Updated 9 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Code for the meQTL analyses presented in Hawe et al. 2021 Nature Genetics☆14Jan 14, 2022Updated 4 years ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…