wurmlab / genevalidatorappLinks
A web wrapper for GeneValidator
☆11Updated 4 years ago
Alternatives and similar repositories for genevalidatorapp
Users that are interested in genevalidatorapp are comparing it to the libraries listed below
Sorting:
- An approximate sequence pattern matcher for FASTQ/FASTA files.☆31Updated 9 years ago
- GeneValidator: Identify problems with predicted genes☆49Updated last year
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆67Updated 3 years ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆59Updated 8 years ago
- Error correction for Illumina RNA-seq reads☆67Updated this week
- a wee tool for random access into BGZF files.☆85Updated 7 years ago
- CRAM format specification and java API for read data.☆59Updated 7 years ago
- PacBio hybrid error correction through iterative short read consensus☆60Updated 6 years ago
- ☆36Updated 8 months ago
- A Python library for reading and writing PacBio® data files☆41Updated 3 weeks ago
- Basic, no assumptions, multi-pileup☆24Updated 11 years ago
- Genome-wide reconstruction of complex structural variants☆39Updated 3 years ago
- Squeakr: An Exact and Approximate k -mer Counting System☆86Updated 10 months ago
- Docker images of bioinformatics software☆21Updated 8 years ago
- Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.☆46Updated 6 years ago
- Scripts, utilities and programs for genomic bioinformatics.☆83Updated last month
- De novo transcriptome assembler for short reads☆64Updated 7 years ago
- This repository has been archived, currently maintained version is at https://github.com/iii-companion/companion☆21Updated 4 years ago
- Experimental pipeline for correcting nanopore reads☆39Updated 8 years ago
- ⛓ Long Interval Nucleotide K-mer Scaffolder☆74Updated 9 months ago
- ☆38Updated last month
- The gkno launcher for executing tools or pipelines☆31Updated 8 years ago
- A C++ header-only library for reading Oxford Nanopore Fast5 files☆53Updated 3 years ago
- Tools for the analysis of structural variation in genomes☆81Updated last year
- An integrated high performance bioinformatics toolkit☆23Updated 6 years ago
- Fully automated generation of UCSC assembly hubs☆35Updated last year
- De novo genome assembly and multisample variant calling☆112Updated 6 years ago
- ☆107Updated last month
- Fast & accurate alignment of barcoded short-reads☆32Updated 2 years ago
- VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications☆90Updated last year