Tumor Immune Single-cell Hub
☆23Aug 13, 2020Updated 6 years ago
Alternatives and similar repositories for TISCH
Users that are interested in TISCH are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆14Apr 22, 2021Updated 5 years ago
- ☆16Mar 24, 2026Updated 7 months ago
- Tools for generating single-cell gene expression data☆34Jun 20, 2025Updated last year
- Testing a neutral evolution model on cancer sequencing data☆10Feb 17, 2021Updated 5 years ago
- ☆17Sep 29, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"☆23Dec 1, 2024Updated last year
- SpaNiche is designed to analyze spatial transcriptome data, focusing on the detection of spatial colocalization patterns and cellular int…☆11Jun 2, 2026Updated 5 months ago
- general repo that holds all analysis and figures for the thymus spatial atlas by Yayon, Kedlian, Boehme, Radtke and many more!☆12Nov 20, 2024Updated last year
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆13May 17, 2021Updated 5 years ago
- MEXPRESS is a data visualization tool designed for the visualization of TCGA expression, DNA methylation and clinical data.☆15Jul 23, 2020Updated 6 years ago
- Functions to analyze copy number aberrations in single-cell data☆13Feb 3, 2025Updated last year
- Cell Annotation using Machine Learning-based method for the presence of Unknown cells (CAMLU)☆13May 19, 2025Updated last year
- A composite regression neural network for latent timing prediction of single-cell RNA-seq data☆10Jan 21, 2025Updated last year
- Pan-cancer quantification of neoantigen-mediated immunoediting in cancer evolution☆14May 4, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Explore and download data from the recount3 project☆42Apr 1, 2026Updated 7 months ago
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆60Jan 6, 2025Updated last year
- ☆12Oct 28, 2025Updated last year
- ☆10Oct 7, 2024Updated 2 years ago
- In this study, we perform systematic comparative analysis of seven widely-used SNV-calling methods, including SAMtools, the GATK Best Pra…☆16Oct 16, 2019Updated 7 years ago
- Statistical analysis for spatial omics data☆12Jul 30, 2022Updated 4 years ago
- proteomics analysis notes☆13Dec 1, 2024Updated last year
- Software for preprocessing, filtering, alignment, and reporting of smallRNA-seq datasets☆26Apr 5, 2023Updated 3 years ago
- ☆15Oct 10, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Gene Set Scoring on the Nearest Neighbor Graph (gssnng) for Single Cell RNA-seq (scRNA-seq) using AnnData h5ad files.☆13Oct 1, 2024Updated 2 years ago
- Spatial Computational Inference of MEtastatic Timing (SCIMET)☆14May 28, 2019Updated 7 years ago
- See https://github.com/LTLA/SingleRBook for the latest version of this content.☆14Jun 21, 2022Updated 4 years ago
- ☆11Jun 3, 2026Updated 5 months ago
- R package to visualize gene expression data based on weighted kernel density estimation☆115Feb 6, 2026Updated 9 months ago
- ☆17Jan 14, 2021Updated 5 years ago
- ☆62Dec 27, 2023Updated 2 years ago
- Deep Learning for Automatic Differential Diagnosis of Primary Central Nervous System Lymphoma and Glioblastoma: Multi-parametric MRI base…☆14Mar 20, 2021Updated 5 years ago
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆28Jul 13, 2026Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Recommendations to contenarized your bioinformatics software☆12May 30, 2018Updated 8 years ago
- ☆13Jun 18, 2026Updated 4 months ago
- ESICCC: A systematic computational framework for evaluation, selection and integration of cell-cell communication inference methods☆13Jan 10, 2024Updated 2 years ago
- Single Cell RNA PolyA Site Discovery☆11Nov 1, 2026Updated last week
- ☆16Feb 11, 2024Updated 2 years ago
- LARIS maps ligand-receptor signalling in spatial transcriptomics within and across tissue states☆19Oct 13, 2026Updated last month
- Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers☆21Oct 12, 2022Updated 4 years ago
Are these results useful?