Transcriptomic classifier for Muscle-Invasive Bladder Cancer
☆16Oct 5, 2022Updated 3 years ago
Alternatives and similar repositories for consensusMIBC
Users that are interested in consensusMIBC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Transcriptomic tools to classify bladder tumours according to six published molecular classifications : Baylor, UNC, MDA, Lund, CIT-Curie…☆28Dec 21, 2022Updated 3 years ago
- ☆20Jul 14, 2021Updated 5 years ago
- Personalized prioritization of driver genes in cancer☆10Mar 14, 2022Updated 4 years ago
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆13May 17, 2021Updated 5 years ago
- R package to do enrichment analysis for neoantigens☆13Feb 21, 2022Updated 4 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ConsensusTME Gene Sets and R Script☆41Jun 6, 2024Updated 2 years ago
- A GenePattern module for running the ssGSEA method☆17Mar 3, 2025Updated last year
- scOntoMatch is an R package which unifies ontology annotation of scRNA-seq datasets to make them comparable across studies☆11Oct 27, 2023Updated 2 years ago
- Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer☆18Nov 30, 2024Updated last year
- ☆10Feb 4, 2021Updated 5 years ago
- ☆17Dec 9, 2019Updated 6 years ago
- An R package for classification of immune subtypes, in cancer, using gene expression data.☆48Mar 6, 2026Updated 4 months ago
- Explore the Hi-Cs☆12Updated this week
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆34Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Contribution of systemic and somatic factors to clinical response and resistance in urothelial cancer: an exploratory multi-omic analysis☆24Oct 31, 2017Updated 8 years ago
- Multi-Omics integration and VIsualization in Cancer Subtyping☆148Jul 19, 2021Updated 5 years ago
- Van Gogh-inspired colour palettes for R with accessibility, metadata, exports, and ggplot2 integration☆12Dec 11, 2025Updated 7 months ago
- Calculating Tumor microenvironment score☆29Jan 20, 2023Updated 3 years ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆31Aug 17, 2022Updated 3 years ago
- A tutorial demonstration of pathml on an example dataset for the manuscript "PathML: A unified framework for WSI analysis with deep learn…☆24Feb 8, 2022Updated 4 years ago
- direct comparison of circular and linear RNA expression☆24Jan 17, 2021Updated 5 years ago
- Repo with analysis code for the vascular atlas paper☆10Nov 22, 2024Updated last year
- Convolutional neural network for categorising prostate cancer from MRI images.☆11Jul 22, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆12Mar 5, 2024Updated 2 years ago
- ☆14Jan 7, 2024Updated 2 years ago
- Diagnostic functions to assess the quality of cell type annotations in single-cell RNA sequencing data☆14Jul 7, 2026Updated 3 weeks ago
- Utility to open a docx document, update indexes and save as pdf.☆13Oct 30, 2018Updated 7 years ago
- ☆11Oct 8, 2021Updated 4 years ago
- An efficient genetic data imputation pipeline☆13Jun 14, 2026Updated last month
- Segmentation-free Analysis of In Situ Capture data☆14Jul 6, 2026Updated 3 weeks ago
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆38Jul 10, 2024Updated 2 years ago
- INTEND (IntegratioN of Transcriptomic and EpigeNomic Data), a novel algorithm for integrating gene expression and DNA methylation dataset…☆11Dec 12, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Code generated by Evelyn Fitzsimons (Regmefi)☆11Aug 30, 2024Updated last year
- 🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R htt…☆163Dec 25, 2025Updated 7 months ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆33Sep 16, 2021Updated 4 years ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆13Dec 15, 2021Updated 4 years ago
- TCGA Splicing Variation Database Cancer Splicing Variant Database Cancer alternative splicing database☆14Jun 9, 2025Updated last year
- ☆19Sep 15, 2020Updated 5 years ago
- ☆12May 24, 2024Updated 2 years ago