Caleydo / vials
Vials is a Caleydo Web application for visualizing alternative splicing based on mRNAseq data.
☆13Updated 7 years ago
Alternatives and similar repositories for vials:
Users that are interested in vials are comparing it to the libraries listed below
- What's The Function of these genes?☆22Updated 8 years ago
- Personal diploid genome creation and coordinate conversion☆24Updated last month
- Simplify snpEff annotations for interesting cases☆21Updated 6 years ago
- ☆24Updated 4 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated 7 months ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆24Updated 9 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated last week
- Software for detecting transposable element insertions from next-generation sequencing data☆14Updated 4 years ago
- ☆9Updated 8 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆33Updated 3 months ago
- A curated list of awesome clonality and tumor heterogeneity resources☆15Updated 5 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆21Updated 3 years ago
- A tool for Read Multi-Mapper Resolution☆23Updated 8 years ago
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- Prioritize structural variants based on CADD scores☆29Updated 4 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 4 years ago
- TREDPARSE: HLI Short Tandem Repeat (STR) caller☆25Updated 4 years ago
- Prepare Sailfish and Salmon output for downstream analysis☆43Updated 5 years ago
- Biological Graphic tool in Python☆34Updated 4 years ago
- ☆23Updated 5 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 5 years ago
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 5 years ago
- python wrapper to dpryan79's bigwig library using cffi☆19Updated 8 years ago
- ☆18Updated 4 years ago
- A JBrowse plugin to view multiple alignment format (MAF) files☆26Updated last year
- Chromatin segmentation in R☆19Updated 7 years ago
- simple library for dealing with SAM cigar strings☆40Updated 4 years ago
- A Framework to call Structural Variants from NGS based datasets☆22Updated 7 years ago
- A Perl extension and collection of utilities for Next-Generation Sequencing (NGS) data analysis☆23Updated 6 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago