Dependency-aware deep generative models for multitasking analysis of spatial genomics data
☆43Jul 10, 2024Updated last year
Alternatives and similar repositories for spaVAE
Users that are interested in spaVAE are comparing it to the libraries listed below
Sorting:
- ☆13Jan 23, 2025Updated last year
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated last year
- ☆13Feb 12, 2026Updated 3 weeks ago
- A Spatial Transcriptomics Geospatial Profile Recovery System Tool through Anchors☆19Jul 24, 2025Updated 7 months ago
- ☆60Apr 5, 2024Updated last year
- ☆15Jun 27, 2025Updated 8 months ago
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆79Jun 24, 2024Updated last year
- Flow2Spatial reconstructs spatial proteomics through transfer learning.☆23May 16, 2025Updated 9 months ago
- Python package for integrating and analyzing multiple single-cell datasets (A Python version of LIGER)☆30May 16, 2025Updated 9 months ago
- Analyzing chromatin accessibility data in R☆18Jun 23, 2023Updated 2 years ago
- Toolbox of the Human Neural Organoid Cell Atlas☆30Updated this week
- ☆10Dec 4, 2023Updated 2 years ago
- Multi-modal single cell analysis pipelines☆62Dec 11, 2025Updated 2 months ago
- COSMOS is a computational tool crafted to overcome the challenges associated with integrating spatially resolved multi-omics data. This …☆13Nov 12, 2024Updated last year
- Code associated with the data analysis for Miyoshi & Morabito 2024☆27Jul 8, 2025Updated 7 months ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Mar 25, 2024Updated last year
- Repository for the scLiTr (single-cell Lineage Tracing analysis) python package☆15Jan 22, 2026Updated last month
- ☆11May 10, 2025Updated 9 months ago
- ☆11Sep 7, 2023Updated 2 years ago
- Unsupervised Deep Disentangled Representation of Single-Cell Omics☆59Updated this week
- monae: multi-modal single-cell integration and imputation