comprna / R2DtoolLinks
Analyse RNA feature distributions.
☆18Updated last year
Alternatives and similar repositories for R2Dtool
Users that are interested in R2Dtool are comparing it to the libraries listed below
Sorting:
- ExTraMapper is a tool to find Exon and Transcript-level Mappings of a given pair of orthologous genes between two organisms using sequenc…☆11Updated 3 years ago
- read, parse and operate different multiple input file formats with OpenVariant☆14Updated last month
- Blazing fast toolkit to work with .hic and .cool files☆42Updated this week
- ☆20Updated 3 years ago
- Importing and manipulating Hi-C data in R☆11Updated 5 months ago
- End-guided RNA assembler☆15Updated last month
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆20Updated 3 years ago
- rnalib: a python-based transcriptomics library☆11Updated last month
- Efficient retrieval, download, and unification of genomic data from leading biodiversity databases☆17Updated this week
- DNA multiple sequence aligner, official version from Penn State's Miller Lab☆36Updated 6 years ago
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Updated last year
- ☆23Updated 5 months ago
- Comprehensive and scalable differential splicing analyses☆17Updated 2 weeks ago
- Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing☆42Updated last year
- A pipeline for identifying conserved topologically associating domain boundaries among multiple species.☆16Updated 6 months ago
- First version of PORE-cupine. Detecting SHAPE modification using direct RNA sequencing☆14Updated 2 years ago
- ☆38Updated last year
- Interspecies Point Projection - A tool for comparative genomics beyond alignable sequence☆20Updated 3 weeks ago
- ☆38Updated 2 years ago
- Scoring GT/AG sites for improving spliced alignment☆48Updated last month
- Clair3-RNA - a long-read small variant caller for RNA sequencing data☆36Updated last week
- R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes☆21Updated 2 years ago
- isoCirc☆10Updated 2 years ago
- FreeHi-C pipeline for high fidelity Hi-C data simulation.☆12Updated 4 years ago
- ☆10Updated 9 months ago
- Ancestry and haplotype aware simulation of genotypes and phenotypes for complex trait analysis☆24Updated 2 weeks ago
- Introme prioritises coding and noncoding splice-altering variants for clinical variant interpretation☆21Updated 2 weeks ago
- Penguin: A Tool for Predicting Pseudouridine Sites in Direct RNA Nanopore Sequencing Data☆14Updated 4 years ago
- curPrimers is a tool for trimming primer sequences from amplicon based NGS reads☆17Updated 7 months ago
- A method for measuring allele-specific telomere length and characterizing telomere variant repeat sequences from long reads.☆22Updated last month